Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1590 ATGCATGGCCCTTCAAGTGGCCTTTTACTTCGTCTGCATCATGGCTACTTCATTAGCCGGCACATGAGCCACAAGCCGCCCTCGCATAACGTTAAAACCCCTTCATTAATACCAAAACAACCCACAAGCTTTTCTCTCTCGAGGTTTTGTCTTCTACTTCGGCCTGAAACGGTGAGAGAGGTGATGATGGAGAAAGCAAATACGTGCGGGGGGCTGGCGAGAACGAAATCTGATCAGCTGGTGGAGGCACTGAAGTCGCAATCGTCGAGCGAATCGATGGGATTGGTGGAGCAGGCCGGAGCCGGGGGCGGAGCAACGCCGTCGAGGAAATCAAGTAGGCGGATGACAGCGGCATCGCCGGGGAGAAGCGGAGGAGGGAAGAACAACACGCACATAAGGAAGTCGAGGAGCGCTCAGCTGAAGTTTGAGCTGGATGAGGTGAGCAGCGGCGCGGCTCTGAGCCGAGCTTCGAGTGCGAGCTTTGGCCTCTCCTTCTCCTTTACCGGTTTCACTCTTCCTCCTGATGAAATCGCCGACTCCAAGCCCTTCAGCGACGACGATATCCCGGAGGATATTGAAGCTGGAGCTGATAAGCCAAAACTTCAAACAGAACCAACTCTGCCCATTTATCTCAAGTTCAGGGAAGTGAGTTACAAGGTGGTGATCAGAGGCATGACAACAACGGAGGAGAAGGAGATATTGAATGGGATCACTGGTTGCGTCAATCCAGGAGAAGTTCTGGCTTTGATGGGTCCTTCAGGAAGCGGAAAGACCACTCTCCTGAATCTTCTTGGAGGCAGGCTAAGTCAGCCCACTGTAAGTGGTTCCATCACTTACAACGACCAACCATATTCCAAGTTCTTGAAGAGCAGGATAGGGTTCGTGACTCAAGATGATGTTCTGCTTCCTCACCTCACTGTGAAGGAAACACTGACATACGCAGCACTCCTGAGACTGCCAAACACAACCACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCATGAGCTTGGCTTGGAGAGGTGCCAAGACACCATGATAGGCGGTTCCTTTGTCCGTGGAGTTTCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTTTGTTTCTCGACGAACCAACTTCTGGTTTGGATTCTACGACAGCCTTGAGAACTGTCCAGATGCTACAAAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAACCATCTAGCAGACTCTTCCACAAATTCGATAAGTTGATCCTTCTAGGAAAAGGCAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGCTTTACTTCCATTCTATAGGATGTTCACCTCTTATTGCCATGAACCCAGCAGAGTTTTTGCTGGACCTTGCGAATGGAAACATAAATGATGTATCTGTACCATCAGAGTTAGATGATAAAGTACAGATGGGAAATGCAGAAACTGAAACCCGGAATGGGAAACCATCACCTGCACTCGTACATGAGTATCTGGTGGAGGCCTATGAGACTCGAGTTGCAGAGACAGAGAAGAAAAGGCTAATGGATCCTATCCCCCTTGATGAAGAAGTGAAGACCAAGGTTTCTTCTACTAAAAGACAATGGGGTGCGAGCTGGTGTGAGCAATATTCCATACTGTTCTGTAGGGGAATTAAAGAGCGGAGACATGATTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCCACTGCAATCATCTTAGGATTACTTTGGTGGCAATCGGATGCGTCCACACCAAAGGGTCTTCAGGATCAGGCAGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGGTTCTTTCCGGTGTTCACTGCAATATTTACCTTTCCTCAAGAGAGAGCCATGCTGAACAAGGAACGTGCAGCTGATATGTACAGACTAAGTGCATACTTCTTAGCCAGGACTACAAGTGACGTTCCATTGGATTTGATACTACCTGTGCTTTTCCTCCTTATTGTCTATTTCATGGCTGGTCTGAAAGTGAGTGCAACTCCCTTTTTCCTCAGCATTCTCACTGTTTTCCTCTGCATCGTGGCAGCTCAGGGACTTGGACTTGCCATCGGAGCTACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTTACTGTAATGACCTTCATGCTGGCTGGAGGATTCTTTGTGAAGAATGTCCCAGTATTTATATCTTGGATTCGGTACGTGTCATTCAACTACCACACGTATAAACTTCTATTGAAGGTGCAATATGAGCATATAACACCAAGCATAAATGGGATGAGAATTGACAGTGGTTGGACGGAGGTGGGTGCTTTGATAGCCATGGTTTTTGGTTATCGTTTATTGGCTTACCTTTCCTTGCGACGGATGAAACTTCAGTGA 2415 0.4729 MHGPSSGLLLRLHHGYFISRHMSHKPPSHNVKTPSLIPKQPTSFSLSRFCLLLRPETVREVMMEKANTCGGLARTKSDQLVEALKSQSSSESMGLVEQAGAGGGATPSRKSSRRMTAASPGRSGGGKNNTHIRKSRSAQLKFELDEVSSGAALSRASSASFGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAGADKPKLQTEPTLPIYLKFREVSYKVVIRGMTTTEEKEILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLSQPTVSGSITYNDQPYSKFLKSRIGFVTQDDVLLPHLTVKETLTYAALLRLPNTTTKEQKEKRALDVIHELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRTVQMLQNIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMLYFHSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELDDKVQMGNAETETRNGKPSPALVHEYLVEAYETRVAETEKKRLMDPIPLDEEVKTKVSSTKRQWGASWCEQYSILFCRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDASTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDVPLDLILPVLFLLIVYFMAGLKVSATPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKNVPVFISWIRYVSFNYHTYKLLLKVQYEHITPSINGMRIDSGWTEVGALIAMVFGYRLLAYLSLRRMKLQ 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1590 804 MobiDBLite consensus disorder prediction 109 133 - -
Lele13g1590 804 MobiDBLite consensus disorder prediction 83 133 - -
Lele13g1590 804 SMART AAA_5 243 434 IPR003593 -
Lele13g1590 804 Pfam ABC transporter 234 385 IPR003439 GO:0005524
Lele13g1590 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 229 445 IPR027417 -
Lele13g1590 804 FunFam ABC transporter G family member 22 221 451 - -
Lele13g1590 804 Gene3D - 210 450 IPR027417 -
Lele13g1590 804 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 211 457 IPR003439 GO:0005524
Lele13g1590 804 Pfam ABC-2 type transporter 414 475 IPR043926 GO:0140359
Lele13g1590 804 CDD ABCG_EPDR 208 439 - -
Lele13g1590 804 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 162 795 - -
Lele13g1590 804 Pfam ABC-2 type transporter 553 761 IPR013525 GO:0016020|GO:0140359
Lele13g1590 804 ProSitePatterns ABC transporters family signature. 357 371 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1590 Lele-ChrLele13 24933264 24941161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1590 232 443 Calmodulin-binding Proteins AT2G36910 30.734 1.08e-15 80.1