Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1589 ATGGGCAACTCCTGTGTGGGACCTAGCCTTGTTGGGAATGGGTTCTTCCAATCGATCACATCCGCTTTCAGAAAAAGCCAGCCGCCGGAGGGCAGGCTTCCAGCGCCTGACGGCGACGAGGACAATAAAAGCACGGAAAATGCTGGACCTGATTCATCTAAAGATTCTGACGCTCCAAAGCAAGTTCAAAGTACACCACCTGAATTGGTGAAAATTCCCAGCGATGAAATAAAGCCGCCGCCGCCACCAGAACCCGAAAAGCCTGCTAAACCCGAGGTCAATGAACCTACCGGTAGTACTTCTGGTGCTGGGAAAGATGAGAAGAATGCTAAGCCGGAGGTGGTGAATGATGAGAAGCCCGCTAAGCCGGATGTGGTCAATGATGAGAAGCCCGCTAAGCCGGAGTTGGTCAATGATGAGGAGCCTGCTAAGCCGGAAGTGGTCAATGATGAGAAGCCTGGTAGGACGGAGATGGTGGTCAATGCCCCTGCTCCTACGGAACCTGAAAAGCCTGTTAAGCCGGAGGTGGTCAACGAAGCTTCTTCCTCTGGCAATACTGCTATTGCCGGTGAAGCTACTAAACCTACTCATGTTAAAAGGGCATCGAGCATTGGACTTCGAATACATTCGATAATTGGTGCTTATGAAGATGCTGTAGCTGTTCATGTGGTTATGGAACTCTGTGCTGGTGGAGAGCTTTTTGACAGGATCATACAGAGAGGGCACTACACTGAGAAAAAGGCAGCCGAGCTTGCAAGGGTGATCGTTGGTGTCGTAGAGGCATTTCATTCTATGGGGGTCATGCATCGGGACTTGAAGCCAGAGAACTTTCTGTTCGTCGGCCAAGAGGAAGAGTCACAGCTTAAGACAATAGATTTCGGCCTCTCGGTGTTCTTCAGACCAGGTGAAACATTTACCGATGTGGTTGGGAGCCCCTATTATGTGGCCCCTGAAGTTTTGCGGAAGTTCTATGGGTTTGTTAATTACATGCCAATTCCTGATGTTCCTTATTTTGGACCAGAAACGGAGCTAGGCATATTTGACCAAGTTTTAAAAGGAGAACTTGACCTTGTCTCTGAGCCATGGCCTAGCATATCTGCAAGTGCAAAGGACCTTCTTCGAAAAATGCTTACTGAAGGTTTTGCTCTTGATAAACCTCTTGATTCTGTTGTTTTAAGTCGTTTGAAGCAATTTTCTGCCAGGAACAAGCTCAAAAAGATGGCGATCCGAGTAATTGCTGAAAGTCTGTCGGAGGATGAAATTGCTGGGTTGAAAGAAATGTTCAAGATGATAGACACAGATAATAGTGGACACATCACTCGTGAGGAACTGAAAGTTGGTTTGGAGAGAGTGGGTGCTTTCCTGAAGGATTCTGAAATTGATCGGTTAATGCAATCGGCAGACACAGATAACAGCGGTACATTAGACTATGGAGAATTCATAACAGCTATGATTCATGAAAACAAGGTCCAACAGGAGGATCGTCTGTATGCTGCCTTCTCCTATTTTGACAAAGATAATAGTGGCTACATTACGCGAGACGAGCTCCAGCAAGCGTGTCAAAAGTTTGGTCTCGAAGATGTTCAATTAGACGATATAATCCGCGAAGTTGACCGGGATAATGATGGGCGTATTGATTATAATGAGTTTGTTGCAATGATGCGAGACTCTGAAAAGGGACTATAG 1686 0.4662 MGNSCVGPSLVGNGFFQSITSAFRKSQPPEGRLPAPDGDEDNKSTENAGPDSSKDSDAPKQVQSTPPELVKIPSDEIKPPPPPEPEKPAKPEVNEPTGSTSGAGKDEKNAKPEVVNDEKPAKPDVVNDEKPAKPELVNDEEPAKPEVVNDEKPGRTEMVVNAPAPTEPEKPVKPEVVNEASSSGNTAIAGEATKPTHVKRASSIGLRIHSIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTEKKAAELARVIVGVVEAFHSMGVMHRDLKPENFLFVGQEEESQLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKFYGFVNYMPIPDVPYFGPETELGIFDQVLKGELDLVSEPWPSISASAKDLLRKMLTEGFALDKPLDSVVLSRLKQFSARNKLKKMAIRVIAESLSEDEIAGLKEMFKMIDTDNSGHITREELKVGLERVGAFLKDSEIDRLMQSADTDNSGTLDYGEFITAMIHENKVQQEDRLYAAFSYFDKDNSGYITRDELQQACQKFGLEDVQLDDIIREVDRDNDGRIDYNEFVAMMRDSEKGL 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1589 561 ProSiteProfiles EF-hand calcium-binding domain profile. 419 454 IPR002048 GO:0005509
Lele13g1589 561 SUPERFAMILY EF-hand 416 554 IPR011992 -
Lele13g1589 561 ProSiteProfiles EF-hand calcium-binding domain profile. 529 560 IPR002048 GO:0005509
Lele13g1589 561 Pfam Protein kinase domain 208 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1589 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 208 550 - -
Lele13g1589 561 ProSitePatterns EF-hand calcium-binding domain. 432 444 IPR018247 -
Lele13g1589 561 MobiDBLite consensus disorder prediction 106 152 - -
Lele13g1589 561 Gene3D Phosphorylase Kinase; domain 1 210 227 - -
Lele13g1589 561 MobiDBLite consensus disorder prediction 34 50 - -
Lele13g1589 561 FunFam Calcium-dependent protein kinase 1 384 558 - -
Lele13g1589 561 ProSitePatterns EF-hand calcium-binding domain. 538 550 IPR018247 -
Lele13g1589 561 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Lele13g1589 561 Gene3D Transferase(Phosphotransferase) domain 1 208 378 - -
Lele13g1589 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Lele13g1589 561 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Lele13g1589 561 Gene3D - 383 559 - -
Lele13g1589 561 SMART serkin_6 175 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1589 561 ProSiteProfiles EF-hand calcium-binding domain profile. 491 526 IPR002048 GO:0005509
Lele13g1589 561 SUPERFAMILY Protein kinase-like (PK-like) 208 378 IPR011009 -
Lele13g1589 561 SMART efh_1 423 451 IPR002048 GO:0005509
Lele13g1589 561 SMART efh_1 495 523 IPR002048 GO:0005509
Lele13g1589 561 SMART efh_1 529 557 IPR002048 GO:0005509
Lele13g1589 561 SMART efh_1 459 487 IPR002048 GO:0005509
Lele13g1589 561 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
Lele13g1589 561 Pfam EF-hand domain pair 424 484 IPR002048 GO:0005509
Lele13g1589 561 Pfam EF-hand domain pair 494 555 IPR002048 GO:0005509
Lele13g1589 561 MobiDBLite consensus disorder prediction 21 152 - -
Lele13g1589 561 ProSiteProfiles Protein kinase domain profile. 145 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1589 Lele-ChrLele13 24924587 24928244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1589 1 560 EF-hand Containing Proteins AT2G38910 53.366 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele13g1589 Pkinase 1.8e-28 CL0016