Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1586 ATGGATTCGGACGCAGTTCCATTTTCCAGCCAATCGGTAAAATGCTGCGACTGTGGGTGTAGATGTTCTTTGGTAGCCGAATCTCCGGGGGCTTGGATTCGTTCCGTTAAACGAAAGCATGATGAGTTTGAACGGGGAAATCAATTGTTTCTACCGGCCTTGAATTACTTTTCAGTTGCACGGGTCCAAATTGAGAATGAATGTGCTGCATTGCGCGAGATAGTTAGCAGACAACAAAAAACTATACAAGATTTATATGCTGAATTGGAGGAGGAGAGAAATGCTTCATCGACAGCTGCAAACGAGGCCATGTCCATGATATTAAGGTTGCAGAGGGAGAAGGCAGAGATTCAAATGGAAGCCCGGCAGTTCAAGTCTTTTGTGCAGGAGAAGATGTTGCATGATCGGGAGGAAATTCTAGCATTTGAGGATTTGTTGTATAAAAGAGAACAAGCAATCGAGTCACTTGCCTGTGAGGTGCAGGCTTATAAGCATAGGATGATGAGCTATGGGCTAACTGAGTCTGAAGCAGATGGTAGGAGTCTGTATATGGAAGATTTTGACCCTGAATATGAACCTTCCATCCGTGAATACCCTCCATTGAAGTGTAATGTAAATGAAATGCATGCTGCGAGGGATGCTGATGATTTAGATGTTGAGAAATATGCATTTGGTGAAACCCCTCGCGATCGATTGAGGAATTTGGAAAGTAGGATCTCTCAAATGGAAGGAAATCCCACACATAGCCAGGCGGATGGGGATATTTCAGGAAAAAATATTCTAGAGAAGGTGATAGTCGGCCAGTCTCCTCGACCAACTAAACATTCAAGGAAATTTTCTGGTGACTCTAGTACATTTGCTGGAATGGGTAGAGATATGAGACCTGAATGTTTTGTGGATTCTCCAAAACTTAGTACTTCCTTCCGGAAGATGGATCATATCTCACTGCCAGAGGAACCATCCAACTTGAAGAAGGTAGATAATACATCAGAAGCTGGTGATGACACCAGTGACAGAGTTTATACCATTGACTCTATTCATAATGGGCCCCCATCCGATGGTTTTAAAGAGTCCAAACCTGTACCTGGTGTTTATGAAGATTATTCAACCACTCCGAGGGTAGATAATGTTTTTGGATATGAAGACCCTGATATTAAAAAGCTATACATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCGATGAAGCAGACAATCATTTCAATGAGTACTGATAAAGCACAGATTGTGCTATTTAGGGAAATAGCTCAACATTTGTGCAAAGAGATGCCACCCCAAAGAAAAATAGCAGTGAATAGGCCATCTGTTGGAAGATTTTCGTCACTTGTTAAGCTGCTTTTTCTTGGAGGAAGAAAGCATGCCAATGCAACTGTATCTAAGAATTATGGATTGCTTTATATAAACCGTGGTCTCAAGCTCAGGGATTCTATCAAAGTAGCAATTTTACGGTGTCCAAAATGTTTGAGTGCAGTGAGAGAAGAAAGACCATTGTACTTGTTTGATCCAAAGTTTGCTGAAAAAGTTCCAAATTCCCAATTTGACGTTCCTGCTTACTTCCAAGAGGACTTGTTTGGTGTCTTGGGGAAAGAGAGACCAGACTACAGGTGGATTATTGTTGGGCCAGCTGGATCAGGATCATCTTTCCTTGTTGATCCAAATTCGACTTCTTCTTGGAATGCAGTAATCAAGGGCTCCAAGAAGTGGATATTATTTCCTCCTGATGTGATTCCAGCAGGAGTTCATCCTAGTCCTGATGGTGCACAGGTTGTATCTCCTGTTTCAATAATTGAGTGGTTTATGAACTTCTATGGTGCGACAAAAAGTTGGAAAAAGAAACCTATTGAGTTCATCTGTAAAGCTGGGGAGGTTGTCTTTGTGCCTAATGGATGGTGGCATTTGGTGATCAACTTGGAGGAGTCCATAGCTATAACCCAAAATTATGTCGGTAGGAGAAACTTGCTTAATGTCTTGGATTTTGTTAGGAGGCCGAATGCGAGCGTGCTAGTATCTGGAACAAGAGATCGAGTGAATTTCGATCCCGACGGCAGTATAATCCATTCGTCTACATATTCAGTATACAGAATAGAAAAAAACTTGAAAATGGGGGAAAATGTTCAACATTCTGAGATGATTCAAATCCAAATAGAAATTGCACGTGCAATGTATTCCTAG 2193 0.4177 MDSDAVPFSSQSVKCCDCGCRCSLVAESPGAWIRSVKRKHDEFERGNQLFLPALNYFSVARVQIENECAALREIVSRQQKTIQDLYAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKSFVQEKMLHDREEILAFEDLLYKREQAIESLACEVQAYKHRMMSYGLTESEADGRSLYMEDFDPEYEPSIREYPPLKCNVNEMHAARDADDLDVEKYAFGETPRDRLRNLESRISQMEGNPTHSQADGDISGKNILEKVIVGQSPRPTKHSRKFSGDSSTFAGMGRDMRPECFVDSPKLSTSFRKMDHISLPEEPSNLKKVDNTSEAGDDTSDRVYTIDSIHNGPPSDGFKESKPVPGVYEDYSTTPRVDNVFGYEDPDIKKLYMRLQALEADRESMKQTIISMSTDKAQIVLFREIAQHLCKEMPPQRKIAVNRPSVGRFSSLVKLLFLGGRKHANATVSKNYGLLYINRGLKLRDSIKVAILRCPKCLSAVREERPLYLFDPKFAEKVPNSQFDVPAYFQEDLFGVLGKERPDYRWIIVGPAGSGSSFLVDPNSTSSWNAVIKGSKKWILFPPDVIPAGVHPSPDGAQVVSPVSIIEWFMNFYGATKSWKKKPIEFICKAGEVVFVPNGWWHLVINLEESIAITQNYVGRRNLLNVLDFVRRPNASVLVSGTRDRVNFDPDGSIIHSSTYSVYRIEKNLKMGENVQHSEMIQIQIEIARAMYS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1586 730 Pfam Zein-binding 70 160 IPR007656 -
Lele13g1586 730 ProSiteProfiles JmjC domain profile. 511 671 IPR003347 -
Lele13g1586 730 Coils Coil 72 120 - -
Lele13g1586 730 Pfam Cupin-like domain 511 654 IPR041667 -
Lele13g1586 730 Gene3D Cupin 475 656 - -
Lele13g1586 730 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 493 685 - -
Lele13g1586 730 Coils Coil 385 405 - -
Lele13g1586 730 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Lele13g1586 730 SUPERFAMILY Clavaminate synthase-like 499 668 - -
Lele13g1586 730 SMART cupin_9 504 671 IPR003347 -
Lele13g1586 730 MobiDBLite consensus disorder prediction 317 337 - -
Lele13g1586 730 FunFam F-box protein At1g78280 462 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1586 Lele-ChrLele13 24908718 24915713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1586 499 660 Glycosyltransferase AT1G78280 45.238 2.98e-40 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele13g1586 Cupin_8 4.4e-12 CL0029