Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1584 ATGGGTTCTCTTCCTCGCGTTGTAGAGGATTGCCTAGGTTTTCTCCAACTCTACAGTGACGGCTCCATTTTCCGATCCGATGACATGGATTTCAATGTTTCACCCTTAGAAGACAACTCTGTACTCTTCAAAGACTGTCTCTTCCACAAAAGATTCAATCTTTATCTTCGTCTCTTCACACCGAAATCCTCCTCCGGCCGTAAGCTTCCACTCATAATGTTCATTCACGGCGGAGGATTCTGTTTCGGCTCGCGAGCCTGGCCCCAACTTCACAATTGTTGCGTTCGCATGGCTTCGGCGCTTCAGGCCGTCGTTGTGGCGACTGACCACCGCCTCGCGCCGGAACACCGGCTGCCGGCAGCAGTGGACGATGCGGTGGAAGCCATGAGGTGGGTGCAGAGGCAGGCTTTGAGTAAGGACGTGATTGATGGCGGTGGAGATGCATGGTTGATGAATGGTGACGTTGACTTCGACCGAGTGTTTATAGTGGGCGACTCATCTGGCGGGAACATCGCACACCATTTGGCGGTTCGGCTGGGATCCGGATCCCGCGAAATGGATCCGGTTCGGGTACGAGGTTACGTGCTGTTGGCGCCCTTTTTCGGTGGGGAAGTTAGAACCAAGTCCGAGGAGAGTGCTCGCGAAAAAATGTTGAGCTTGGACTTACTAGACAGATTTTGGAGACTGTCAGTTCCTGTGGGAGAGAATAGAGATTATCCAATGGCGAACCCTTTCGGACCTGCAAGTCCAAACCTTGAACAAGTGATGCTTGATCCTATAATGGTGATAGTTGGAAGCAATGAATTGCTGAAAGATAGAGCACAGGACTATGCAAGAAGATTGAAGGAGCTAGGGAAAACGATTGAGTACATTGAGTTTGAAGGAAGAGAACATGGGTTTTTCACTCAAGATCCTTTCTCACAAGTTGCAGGAGAAGTCATGCAAATCCTCAGACGATTCTTGCTTGAAAATTCTAGTTAG 981 0.4975 MGSLPRVVEDCLGFLQLYSDGSIFRSDDMDFNVSPLEDNSVLFKDCLFHKRFNLYLRLFTPKSSSGRKLPLIMFIHGGGFCFGSRAWPQLHNCCVRMASALQAVVVATDHRLAPEHRLPAAVDDAVEAMRWVQRQALSKDVIDGGGDAWLMNGDVDFDRVFIVGDSSGGNIAHHLAVRLGSGSREMDPVRVRGYVLLAPFFGGEVRTKSEESAREKMLSLDLLDRFWRLSVPVGENRDYPMANPFGPASPNLEQVMLDPIMVIVGSNELLKDRAQDYARRLKELGKTIEYIEFEGREHGFFTQDPFSQVAGEVMQILRRFLLENSS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1584 326 PANTHER ARYLACETAMIDE DEACETYLASE 12 301 - -
Lele13g1584 326 Coils Coil 267 287 - -
Lele13g1584 326 Gene3D alpha/beta hydrolase 16 325 IPR029058 -
Lele13g1584 326 Pfam alpha/beta hydrolase fold 72 301 IPR013094 GO:0016787
Lele13g1584 326 SUPERFAMILY alpha/beta-Hydrolases 5 321 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1584 Lele-ChrLele13 24894332 24896222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1584 7 304 Carbohydrate Esterase AT5G16080 33.553 6.33e-56 183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0839 06 5207579 5210763 Lele13g1584 13 24894332 24896222 CCT
Lele07g1019 07 6123276 6125530 Lele13g1584 13 24894332 24896222 CCT
Lele08g0828 08 5219802 5223015 Lele13g1584 13 24894332 24896222 CCT
Lele05g1529 05 9811365 9813027 Lele13g1584 13 24894332 24896222 CCT
Lele13g1584 13 24894332 24896222 Lele15g0834 15 4836672 4838551 hybridization
Lele13g1584 13 24894332 24896222 Lele16g0852 16 4778886 4780883 hybridization