Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1573 ATGGCCAAGCTAGTCTCCAATATCTTCATTCCTCTCGCCACTGTCTTTGTATTCTTCTTCTCATCCTCCCTCGCCACGGTGGAAACGGAGCGTTTCTCCAGAAATCTCTCTCCTTCATCCTTGGGCCTCCAGGAGGAGAAGCTGATCCACCTTCACTTCTACTTTCACGATATCGTCAGCGGCCCAAAACCCACCGCCGTGAGAGTGGCAGAGGCTCTGGTGACCAACACTTCCTCTACGGGGTTCGGAGCAGTCGCGGTGATCGACGACCCGTTGACCTTAGGACCCAACCCCGATTCCAAACGCGTGGGAAGAGCCCAAGGCGTTTACGCCTTGGCGTCGCAAAGCGAGGCGGGCTTGTTGATGGTCATGAACTTTGCATTCACGGAAGGCAAATATAATGGCAGCACTCTAAGCATCTTGGGGCGGAACAAGGTGTTTGACGCCGTGAGGGAGATGCCGATCGTCGGAGGGAGCGGCGCTTTCCGATTCGCTCGTGGGTATGTTCAGGCTAAGACTCACACGTTCGATCTCAAAACCGGGGATGCTGTCGTGGAATATGACGTGTATAGAAGTAACTCTCCAGTCTCAGCCTCCGCCATGGCTAAACTCGCCTCCAGTTTCTTCATTCCTCTCGTCTTCCTCCTGTTCTCATCCTCCCTCGCCACCACCAGAACGACCCGTTTCTCTCGAACCATATCCCCGTTATCTCTGGGTCTTGGTGAGGAAAAACTGAGCCACCTTCACTTCTACTTCCACGACATCGTGAGCGGCCCAAATCCCAGCGCCGTGAGGGTGGCTGCGGCCGGTATGACTAACAGTTCGCCGACGGGATTCGGGGCAGTGGTGATGATGGATGATCCATTGACGGCAAGGCCCGAGCTCAGCTCTACGATCGTGGGAAGAGCCCAAGGTATCTACGCGTCGGCGTCGCAAGAAGAAGCGGGTTTTTTGATGGTGGTGAACTTTGCTTTTACGGGAGGGAAATATAACGGCAGCAACTTGAGCGTCTTAGGGCGGAACAAGGTGTTATCCACCGTGAGGGAGATGCCGATAGTCGGAGGGAGCGGCGCTTTCCGGTTCGCACGTGGCTATGCTCAGGCTAATACTCACACGTTTGATCCTACAACAGGGGACGCTATAGTGGAGTACAACGTCTACGTGTTCCATTATTGA 1176 0.5459 MAKLVSNIFIPLATVFVFFFSSSLATVETERFSRNLSPSSLGLQEEKLIHLHFYFHDIVSGPKPTAVRVAEALVTNTSSTGFGAVAVIDDPLTLGPNPDSKRVGRAQGVYALASQSEAGLLMVMNFAFTEGKYNGSTLSILGRNKVFDAVREMPIVGGSGAFRFARGYVQAKTHTFDLKTGDAVVEYDVYRSNSPVSASAMAKLASSFFIPLVFLLFSSSLATTRTTRFSRTISPLSLGLGEEKLSHLHFYFHDIVSGPNPSAVRVAAAGMTNSSPTGFGAVVMMDDPLTARPELSSTIVGRAQGIYASASQEEAGFLMVVNFAFTGGKYNGSNLSVLGRNKVLSTVREMPIVGGSGAFRFARGYAQANTHTFDPTTGDAIVEYNVYVFHY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1573 391 Pfam Dirigent-like protein 246 389 IPR004265 -
Lele13g1573 391 Pfam Dirigent-like protein 49 190 IPR004265 -
Lele13g1573 391 Gene3D - 37 203 IPR044859 -
Lele13g1573 391 Gene3D - 239 384 IPR044859 -
Lele13g1573 391 PANTHER NUCLEOPORIN-RELATED 33 190 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1573 Lele-ChrLele13 24795692 24798895 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0816 06 5026493 5027272 Lele13g1573 13 24795692 24798895 CCT
Lele07g0990 07 5958430 5959209 Lele13g1573 13 24795692 24798895 CCT
Lele08g0804 08 5059370 5060149 Lele13g1573 13 24795692 24798895 CCT
Lele13g1573 13 24795692 24798895 Lele15g0851 15 4941621 4946028 hybridization