Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1560 ATGCCTCTATTCCCAGCCCGTTCGGAGGCCTCACCAACATCACAAACAATTGCACACACTTTTGGTCGTTCCCACTGTCGATTCTTCAGCAGCCGACTGTTCAACTTCAGTGGAACTGGCCTCCCCGATCCGACAATGGACGTGGCCACTCTGCAGCAAATTTGTCCACAAAATGGAAACGAGTCTACTCTGAACAACCTTGAAGCTTCGTCCCCAGACAGGTTTGATAACAACTACTTCAAGAATCTTCAAGCGAACCGGGGGCTTCTGCAATCAGACCAAGAGTTGTCTTCCACGAACGAGTCTTCTGCAGTGTCCACTGTTAACAATTTTGCCAGCAACCAAACAGCCTTCTTTCAGGCGTTTGCTCGGTCAAGCATAAATATGGGGTAA 393 0.4885 MPLFPARSEASPTSQTIAHTFGRSHCRFFSSRLFNFSGTGLPDPTMDVATLQQICPQNGNESTLNNLEASSPDRFDNNYFKNLQANRGLLQSDQELSSTNESSAVSTVNNFASNQTAFFQAFARSSINMG 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1560 130 Pfam Peroxidase 18 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 SUPERFAMILY Heme-dependent peroxidases 18 130 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 PANTHER - 18 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 ProSiteProfiles Plant heme peroxidase family profile. 18 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 FunFam Peroxidase 16 129 - -
Lele13g1560 130 PRINTS Haem peroxidase superfamily signature 68 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 PRINTS Haem peroxidase superfamily signature 11 26 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 PRINTS Plant peroxidase signature 124 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 PRINTS Plant peroxidase signature 82 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 PRINTS Plant peroxidase signature 66 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 PRINTS Plant peroxidase signature 10 22 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1560 130 Gene3D Peroxidase, domain 2 10 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1560 Lele-ChrLele13 24712601 24713147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1560 18 130 Peroxidase AT5G06720 67.241 1.03e-49 159