Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1557 ATGTTCCATACGTCTCAATTGCTAGCAGTAATCTTCAATATTATTGCCCTTGTTCAAGTTAGCTGCTTTTCTTTCAACTTCCCAAGCTTCCAGCCCGATGATGAACCAAATTTAATTTTGAGCAAGAACTCAAAAATATACCTGGATGCCATCCAAGTAACCCCTGATACTCGTAGTAACATAACAAATTATTCTGGCCGAGCTTTCTACAGAAGGCCATACAGATTATGGAGCAAGAGCGAAAAGCGAACTGCTGATTTTAATACCACCTTCGTGCTCCGTATCAGCAATCAAACTTCCCCAGGGGGTGAAGGCTTGGCCTTTATATTAACTGGAGATACCAATCTTCCAGAAAACAGTGCCGGAGAATGGCTTGGAATCGCGAATGCTACAACCAATGGCACTTCTCAACATGCGATTTTGGCAGTGGAGTTCGACACGAGACAGAACTCCGAGGAAGATGGCCCCGACAACCATCTTGGTGTCAACATCAATAGTATCAACTCCATGATGCACGTTTCATTACCAGACTTGGGGATTACTATTGCATCGGACATGGATGTCATGATCACAGTTCAGTATGCGAAAGATGTAATATCTATTTTTGGTTCCATGAATAGAAGTGCAGATATGAAGACCCTGCTAATTTCTCCACCTCTCAATCTATCTTCATATCTACCAGAAGAGATTTTCTTGGGTTTCTCAGCTTCAACAAGTAACTATACAGAGCTGAACTGTGTAAGAGCTTGGGAATTCAACGGCACCCGAATTGCAGGTGATGGCCCAGAGCTGTTGTGGGTTTGGATCACAGTTCCTGCAGTGATAGTCATCTTATTCTTAGGTGGGGTGATCTTTTTCTTGCTTTGGCAAAGGAAACGCCGTATGGAGATGTCAGATGAAGCATACCCGAGAATAGAGGATCAGATTCAACACAGCTCTATGGTACCGAAGAAATTCCGACTAGGAGAAATAAAAAAAGCAACAGGCAGATTCAGTCCTCAATACATGCTTGGGGAAGGAGGTTTTGGAACTGTCTACAAGGGGTTGTTGGGAGGCAAGGAGGTAGCTGTGAAAAGAGTCTCCAAGGATTCACGTCAAGGCAAACAAGAGTTCGTAACAGAAGTGACAATAATAGGAAGCCTGCATCATAGGAATCTTGTAAAATTGATCGGGTGGTGCTATGAGAGTCGAGAACTCCTCCTTGTCTACGAGTTCATGCCTAATGGGAGTCTAGACAAGTACCTATATGATGATGAGAAGCATGGCTCCAAAGATGGATCAGTACTAAGCTGGAAAACAAGACACAATGCAATATACGAGGTGGCTCAGGCACTAGACTACCTGCATAACGGATGTGAGAAAAAGGTGCTTCATAGAGACATAAAAGCCAGCAACATATTATTGGACTCAGACTTCACAGCCAAGTTAGGAGACTTTGGATTAGCTCGTACTATTCAAAAGAGAGACGAAACTCACCACTCGACAAGAGCAATTGCAGGAACACCTGGCTACATGGCTCCAGAAACATTCCTTACAGGGAGGGCAACCGTGGAGACAGATGTGTATGCATTTGGCATTGTTGTGTTAGAAGTTGTGTGTGGGATGAGACGGAGGAATCTGGATTCTCAGGAGGATGAGTATAAGAATAACATTGTGCATTTGGTGTGGGAGCTTTACGGGAAGGGAAGATTACTAGCTGCCGTTGATAGTAGAATCATAAAAGAAATAGAAAAGGAGAAGGTGCAAGATGTGCTTGTTCTAGGTTTGGCGTGTTGTCATCCAAACCCACACCACAGGCCTTCCATGAGGACCGTTATGCAGGTTCTTACAGGAGAAGTAGCTCCACCAGAAGTACCCAAGCAAAGACCTGCTTTTGTGTGGCCTGCCTTGCCTCCTTCCTTCGCCCTTGAAGGGGATACCTCTACCACAGGAACCCAACTCGCTCCCTTCTTAGCCGACTTGGAGGTCACTGCCAGATGA 1980 0.447 MFHTSQLLAVIFNIIALVQVSCFSFNFPSFQPDDEPNLILSKNSKIYLDAIQVTPDTRSNITNYSGRAFYRRPYRLWSKSEKRTADFNTTFVLRISNQTSPGGEGLAFILTGDTNLPENSAGEWLGIANATTNGTSQHAILAVEFDTRQNSEEDGPDNHLGVNINSINSMMHVSLPDLGITIASDMDVMITVQYAKDVISIFGSMNRSADMKTLLISPPLNLSSYLPEEIFLGFSASTSNYTELNCVRAWEFNGTRIAGDGPELLWVWITVPAVIVILFLGGVIFFLLWQRKRRMEMSDEAYPRIEDQIQHSSMVPKKFRLGEIKKATGRFSPQYMLGEGGFGTVYKGLLGGKEVAVKRVSKDSRQGKQEFVTEVTIIGSLHHRNLVKLIGWCYESRELLLVYEFMPNGSLDKYLYDDEKHGSKDGSVLSWKTRHNAIYEVAQALDYLHNGCEKKVLHRDIKASNILLDSDFTAKLGDFGLARTIQKRDETHHSTRAIAGTPGYMAPETFLTGRATVETDVYAFGIVVLEVVCGMRRRNLDSQEDEYKNNIVHLVWELYGKGRLLAAVDSRIIKEIEKEKVQDVLVLGLACCHPNPHHRPSMRTVMQVLTGEVAPPEVPKQRPAFVWPALPPSFALEGDTSTTGTQLAPFLADLEVTAR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1557 659 Gene3D - 20 255 - -
Lele13g1557 659 ProSitePatterns Protein kinases ATP-binding region signature. 337 358 IPR017441 GO:0005524
Lele13g1557 659 FunFam Probable L-type lectin-domain containing receptor kinase S.5 22 261 - -
Lele13g1557 659 FunFam probable L-type lectin-domain containing receptor kinase S.5 406 615 - -
Lele13g1557 659 Pfam Legume lectin domain 24 257 IPR001220 GO:0030246
Lele13g1557 659 CDD STKc_IRAK 337 611 - -
Lele13g1557 659 ProSiteProfiles Protein kinase domain profile. 331 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1557 659 Gene3D Phosphorylase Kinase; domain 1 316 405 - -
Lele13g1557 659 Gene3D Transferase(Phosphotransferase) domain 1 406 615 - -
Lele13g1557 659 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 304 405 - -
Lele13g1557 659 Pfam Protein kinase domain 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1557 659 SMART serkin_6 331 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1557 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 259 IPR013320 -
Lele13g1557 659 SUPERFAMILY Protein kinase-like (PK-like) 312 609 IPR011009 -
Lele13g1557 659 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
Lele13g1557 659 PANTHER - 55 616 - -
Lele13g1557 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Lele13g1557 659 CDD lectin_legume_LecRK_Arcelin_ConA 23 255 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1557 Lele-ChrLele13 24686950 24688929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1557 57 623 Receptor kinase-like Gene Family AT5G10530 37.838 1.24e-120 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele13g1557 Pkinase 2.9e-51 CL0016