Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1554 ATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCGTGCTTGAGGCCGGTAAGGCGGTATGCCCGCATGAACAAGGATGATGTTGATGATCCTTCCTCGATTGATGACTCTCTGCTATGGTATAAGGACCTCGAGAAACACTCGTGCGGCGAATTCTCTTATGCTGTGGTTCAGGCCAATGAAATTATCGAGGATCACAGCCAGGTCGAGACTGGCTCCGACGCAATGTTCATCGGAGTATACGACGGCCACGGCGGTCCCGAAGCGTCTCGGTTCATCAGCGACCACCTCTTCCATCATCTAATGAGGATAGCTCGAGATAATGGTACTATATCTGAAGATATCCTGAGAGGTGCTGTTTCTGCGACTGAAGATGGATTTCTGACTTTTGTTCGAAGGACTTATGGCATAAAGCCATTGATGGCGGCAATCGGTTCCTGTTGTCTTGTTGGTGTTATTTGGAAAGGGACATTATATGTCGCCAACCTTGGAGACTCTCGTGCAGTAATTGGTTCTGTTGATAGATCTAATAAGATCGTTGCCGAGCAGTTGACTAGAGAGCACAATGCTAGCAAAGAGGAGGTTCGACGTGAACTTAGGTCCTTGCATCCTGAAGATTCACAGATTGTAGTCATGAAGCATGGAACATGGCGCATTAAGGGAATCATCCAGGTATCTAGATCTATAGGTGATGCATATTTGAAAAGACCAGAGTTTTCTCTTGATCCTTCGTTCCCACGATTCCACCTACCGGAACCTATCCGGCGTCCTGTGCTGACAGCCGAGCCATCTATATGCTCGAGGGTCCTACAACCTAATGATAAGTTCCTAATATTTGCGTCTGATGGACTTTGGGAACACTTGACAAATCAGGAAGCTGCAGAGATCGTGCATAACAATCCCCGGACGGGGATAGCAAGAAGACTGCTTAAAGCCGCTCTGAACGAGGCGGCAAGGAAACGAGAAATGAGGTATAAAGATCTGCAGAAGGTTGAGAAGGGGATCAGGAGGTTCTTTCATGATGATATCACGGTCGTGGTTGTCTTCATCGACCACGAGATGGTTGGGAAGAATATTGCAGTACCAGAACTGTCCATCAGAGGCTTCACTGACACGGTTGGTCCATCCAATTTTAAGGTCGTCCGGGATTGA 1149 0.4752 MFSWLARIVSACLRPVRRYARMNKDDVDDPSSIDDSLLWYKDLEKHSCGEFSYAVVQANEIIEDHSQVETGSDAMFIGVYDGHGGPEASRFISDHLFHHLMRIARDNGTISEDILRGAVSATEDGFLTFVRRTYGIKPLMAAIGSCCLVGVIWKGTLYVANLGDSRAVIGSVDRSNKIVAEQLTREHNASKEEVRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICSRVLQPNDKFLIFASDGLWEHLTNQEAAEIVHNNPRTGIARRLLKAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVVFIDHEMVGKNIAVPELSIRGFTDTVGPSNFKVVRD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1554 382 Pfam Protein phosphatase 2C 67 318 IPR001932 -
Lele13g1554 382 ProSiteProfiles PPM-type phosphatase domain profile. 47 349 IPR001932 -
Lele13g1554 382 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Lele13g1554 382 Gene3D - 31 358 IPR036457 -
Lele13g1554 382 Coils Coil 180 200 - -
Lele13g1554 382 SUPERFAMILY PP2C-like 54 350 IPR036457 -
Lele13g1554 382 CDD PP2Cc 51 349 IPR001932 -
Lele13g1554 382 FunFam Probable protein phosphatase 2C 42 41 357 - -
Lele13g1554 382 PANTHER PROTEIN PHOSPHATASE 39 347 - -
Lele13g1554 382 SMART PP2C_4 44 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1554 Lele-ChrLele13 24673520 24675946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1554 1 379 PP2C-type Phosphatase Gene Family AT5G06750 70.256 0.0 559