Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1530 ATGGATTTGAATTCGCATCAGAATTATCAGCCCCAGAAGCATCAATCCAATTCAGGATTGGCTCGCTTTCGCTCTGCGCCCAGTTCGCTTCTCGCTAATTTCAGACAAGCTGCTGAATCTGTTAAATCCGAGAGGCGAATTTCGAGATTCGCAAACAGCAGTAATAGCCACGATACGGCGTCGCCGAGTTTTCAAGAATTCGAATCCGAACACAAAACCCCTAAATCTCCATCGCAGGCTGCTCTGAACCGCATGAATTCCCAGCAAGGCCATAGTGGCGGCGGCCTACCACCTCACTATCCAACGCACAGTTCTTCTTATAGTTCATCCATGGATAGCTCCTTTGGACTGATGGGTTCAATGGGAATGGATCACGAAACTCGGCCAAAAAGTTTTGCTTCGTCTCTTCTTAGGCAAAGTAGCTCCCCTGCCGGTCTTTTCTCCAACGTCCCATTTCCTAATGGGTATGGCACCATTAAAGAGGTAAGAAACTATGGTGCGGTGAACGGCAGTAGTATAGGTGGACTTACTCCATCTATCAACGGATTGAAGAATCAGATTAACTTCTCATCAAGAAGTATCTCCCTAGGAGCCCTGTCCCAGATCTCTGAAATAGAATGTGATGGTATTGGAGCAACGAGCCCAGATGATGGTAGGGTGGGAACTAATAATAATGGTGATACTCGGTATTATGGCCCTGGCTTCCCTTATGCCTCCTGGAATGATACTTCACATGTCTCAGAAAATCTCAACGGTTTTAAAAGAGATCAAACTAGTAATGAAAAGTTGTATTCTGATGCTCAGAATATTGAGCCTGGAAGTCGCGTTAATGTATTATCGCATCACTTGAGTTTGCCAAAAACCCTATCACATGCGGCTGGTGTGGAGAAGTTTCTTCAATTCCCAGATTCTGTTCCTTGTAAAATAAGAGCAAAGCGGGGCTGTGCCACTCATCCACGAAGCATAGCCGAAAGGGTTAGGAGAACTCGTATCAGTGAACGGATGAAGAAGTTACAGGATCTTGTCCCAAACATGGACAAGCAAACAAACACAGCAGACATGTTGGACTTGGCTGTGGTGTATATTAAAGATCTTCAGAAACAATTCAAGACTCTGAGTGAGAAACGGGCTAAGTGCAGGTGTACGAGTACGAAGAAAGCAGAAGCAAATTAA 1173 0.451 MDLNSHQNYQPQKHQSNSGLARFRSAPSSLLANFRQAAESVKSERRISRFANSSNSHDTASPSFQEFESEHKTPKSPSQAALNRMNSQQGHSGGGLPPHYPTHSSSYSSSMDSSFGLMGSMGMDHETRPKSFASSLLRQSSSPAGLFSNVPFPNGYGTIKEVRNYGAVNGSSIGGLTPSINGLKNQINFSSRSISLGALSQISEIECDGIGATSPDDGRVGTNNNGDTRYYGPGFPYASWNDTSHVSENLNGFKRDQTSNEKLYSDAQNIEPGSRVNVLSHHLSLPKTLSHAAGVEKFLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMDKQTNTADMLDLAVVYIKDLQKQFKTLSEKRAKCRCTSTKKAEAN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1530 390 MobiDBLite consensus disorder prediction 74 111 - -
Lele13g1530 390 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 380 - -
Lele13g1530 390 Pfam Helix-loop-helix DNA-binding domain 320 366 IPR011598 GO:0046983
Lele13g1530 390 MobiDBLite consensus disorder prediction 47 63 - -
Lele13g1530 390 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 315 365 IPR011598 GO:0046983
Lele13g1530 390 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 318 381 IPR036638 GO:0046983
Lele13g1530 390 MobiDBLite consensus disorder prediction 1 36 - -
Lele13g1530 390 SMART finulus 321 371 IPR011598 GO:0046983
Lele13g1530 390 MobiDBLite consensus disorder prediction 1 111 - -
Lele13g1530 390 FunFam Transcription factor bHLH130 family 316 385 - -
Lele13g1530 390 Gene3D - 316 388 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1530 Lele-ChrLele13 24534462 24536568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1530 1 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 48.312 6.50e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele13g1530 HLH 2.2e-09 No_clan