Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1527 ATGATGGAGCAAACTACAGGAGGCCTGCCCGGATCCAGTCTTGCCATTCGTGAGCACGATAAGTCCGCGCTTGAACCCATCCAATTGAACCAAGAAATTCAGGGAATCATGGCTCCGCCCCCTGAAAACGCGAGCTCATTCACTGCACTTCTCGAACTCCCACCACCGCAAGCTGTGGAGCTCCTTCACTCGCCGGACTGTGGCGGAACCGCCGGCACTAGCAGCGCGTCTGCGAAATCCCTTTGCCAAATCAACAATCAGAAACCCTATCTATTCCACTCTTTCAGTGGCAATTTAAGTTTTCCTGCTAACGCCGCTTTGATCGAGCGCGCTGCCAAGTTCTCTATGTTTGCCGGGGAAAACTCCCACCCAGAGGATTCCAGCTTGGTTGGACCTAATTCGGGTGCCGATTTGGATAAAGTAAAGAATGAGCCCCCAGAAAGCGATTCGAATCCTAGTTCAATTCAGGGTTGTGTTTCTGATCCCGCCATTGAGAACCCGAACCAGAGGGCCGCCAAGAGGAAGGAGCGAGAAAAGAAGGTTAAAGGGTACTCAAAGAAGAGTAAGGGCGTCGCCGACGAGGCCTCCGGGGAAGCTGAAAAGCTTCCCTACGTTCACGTTCGAGCTCGTCGAGGTCAAGCTACAGACAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGGATGAAGCTTTTACAAGAACTGGTCCCCGGCTGCAACAAGATATCAGGAACTGCGTTGGTTCTGGATGAAATCATCAACCATGTGCAATCTCTACAACGGCAAGTGGAGTTCTTATCAATGAAATTGGCTGCGGTTAATCCAAGAATTGACTTCAACCTTGACAGCATATTGGCTACAGAAGGTGCATCTCTCATGGATTGTAACTTCCCCAGCCCGGTTGCCCCTTTGGTGTGGCCAGAAATCCCGGTCAATGGAAACAGACAGCAATATCAACAACAGTGGCAAGTTGATGCATTCCACCAACCACTTTGGGGGAGAGAAGAAGGAAACCATAACTTTATCACTCCAGATAACTCTTTTTTGAGTTATGATTCGTCAGCAAATTCAGCATCTCTGCACTCAAATCAGTTGAAGATGGAGCTCTGA 1122 0.4955 MMEQTTGGLPGSSLAIREHDKSALEPIQLNQEIQGIMAPPPENASSFTALLELPPPQAVELLHSPDCGGTAGTSSASAKSLCQINNQKPYLFHSFSGNLSFPANAALIERAAKFSMFAGENSHPEDSSLVGPNSGADLDKVKNEPPESDSNPSSIQGCVSDPAIENPNQRAAKRKEREKKVKGYSKKSKGVADEASGEAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRIDFNLDSILATEGASLMDCNFPSPVAPLVWPEIPVNGNRQQYQQQWQVDAFHQPLWGREEGNHNFITPDNSFLSYDSSANSASLHSNQLKMEL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1527 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 213 263 IPR011598 GO:0046983
Lele13g1527 373 MobiDBLite consensus disorder prediction 119 197 - -
Lele13g1527 373 CDD bHLH_AtBPE_like 203 288 - -
Lele13g1527 373 Coils Coil 253 273 - -
Lele13g1527 373 MobiDBLite consensus disorder prediction 183 197 - -
Lele13g1527 373 Gene3D - 210 283 IPR036638 GO:0046983
Lele13g1527 373 SMART finulus 219 269 IPR011598 GO:0046983
Lele13g1527 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 211 282 IPR036638 GO:0046983
Lele13g1527 373 MobiDBLite consensus disorder prediction 147 163 - -
Lele13g1527 373 Pfam Helix-loop-helix DNA-binding domain 217 264 IPR011598 GO:0046983
Lele13g1527 373 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 102 356 IPR024097 GO:0006355
Lele13g1527 373 FunFam transcription factor bHLH48-like isoform X1 210 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1527 Lele-ChrLele13 24512228 24516701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1527 23 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 55.937 2.32e-110 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele13g1527 HLH 1.4e-05 No_clan