Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1523 ATGGAGTGCCATGGGCACAAAACTATTTGGCTTGAAAACAAGTTTACTTATCTTACTACGACAAGGGGCAGAAAATTCAGCGGTGAAATCTTTGAGAAGAAACAGAAAATGATAAATGAAATGTGGTCCATAAGCACAGTGAATAATAATAATATGTACGAGTCAGTGACGATTGTATTGTATGTATGTGCAAGGGACATTTCCAAGTTTCCATTATTGATTCTATGTTCAGCGTTGAAAACTCATTTCCTCGATTTTCTTCTCTTCTGGGGTCAATGGATTGATGGATTCTGTGCTGGCTCCTCTTTTTGGAGAGATTTGGTCCATCATCGACGTTCATTAATATCAACTCAGTCACACTCCACTCTATCTGATATATACGAGGAAAGAGTTGAAAACACCACGAAGCAAGCCCTCTTGATTCCCCACACCGAGCTCATGGCTACGCTCTGTACATACCTGTTCCTTCTCTCTGTGACCCTCTCAACCTTCAATCTTGGTTCTTCATCTTCTTCGTCAGAGGCGGATATCCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCTAGGAATGCTCTGTCAAGCTGGTCCAATACTTCTTCCACTCACTACTGTAACTGGACTGGAATCGCCTGCTCCACCGCCTCTCCTCTCTCTCTCACTTCCATTAACCTTCAGAACTTGAACCTTTCTGGGGACCTCTCATCTTCGATATGTGATCTCCCAAATCTGTCATACCTCAATCTTGCTGATAATATATTCAACCAACCCATCCCTCTTCATCTTTCTCAGTGTAGTTCGTTAGAGACTTTGAATCTCAGTAATAATCTCATATGGGGAACCATCCCAATGCAGATTTCTCAGTTTGGTTCATTGAGAGTGCTCGATTTCAGCAGAAATCACATAGAAGGAGATATCCCAGAAAGCTTGGGCTCCCTCAAGAACCTCGAGGTCCTTAGCATGGGAAGTAACCTACTATCAGGTGATGTACCAGCTATCTTCATGAATTTAACCAGGCTTGCCGTTCTTGACTTGTCTGAAAATCCATACTTGGAAAGTGAGATTCCTGAGGGCATAGGCGAACTTGGGAGTCTCAAGCAACTTCTATTGCAAAGTTCTGGTTTTCACGGTGAAATTCCGGATTCTTTTGCGAACCTGCGTAGCTTGACTCATTTAGACCTCTCTCAGAACAATCTAACCGGTGAGATTCCTCAGGGTCTGGTGTCTTCTCTCAAGAACCTGGTGTCTTTTGATGTTTCACAGAACAAGCTTTCGGGGTCATTTCCAAATGGCATTTGTAATGCAAAAGGTCTCATAAATCTCAGTCTCCATACAAATATTTTCGGTGGTCCAATAGCCAACACCATTGGTGAATGTAAGAATCTTGAGAGATTTCAAGTTCAGAACAACCAGTTAACTGGAAACTTCCCTTATTCATTATGGTCATCACCTAAAGTTAAGCTCGTTAGAGCTGAAAACAACAGATTCTCAGGACAGATACCTGAATCCATTTCGGGAGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAATAACAGCTTTGCCGGGAAAATTCCTCAGAGTCTTGGGCTGGTCAAGAGCTTATACAGATTCTCTGCGTCTCTCAATCGTTTCTACGGAGAACTTCCTGTAAACTTTTGTGATTCCCCTGTTATGAGTATTGTGAATCTCTCTCACAATTCCCTTTCTGGTCAAATCCCAGAGCTGAAAAAATGCAGGAAGCTTGTTTCATTGTCTTTAGCAGACAATAGTCTCACCGGACAAATCCCTCTCTCCCTTGCTGAGTTGCCAGTGCTAACTTATCTTGATCTTTCAGCTAACAATCTCACTGGTTCAATCCCACTAGGACTTCAAAATTTAAAGCTTGCTCTTTTCAATGTATCCTTCAATCAGCTATCTGGTAAGGTACCTTACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGAACTTTGTGGCCCTGGATTACCCACTTCCTGCTCTGATGACCCTCAAAGACACCATTCCGGGGGTCTCACTGCCCTAGCATGTGCTCTTATCTCTGTAGCTTTCGTTATAGGAACTGCGATGTTTGTTGGTGGATTTATTTTGTATAGGAAGTCTAGCAAGAGGAATCAAATAGGAGTTTGGCGCTCAGTGTTCTTCTATCCTCTTAGAATTACTGAGCAAGATCTGCTTATAGGAATGGATGAGAAAAGCTTGATTGGAAATGGTGGGGTCTTTGGCAAAGTTTATATTGTGAGTTTACCCAGCGGTGAACAAGTGGCTGTAAAGAAGCTAGTGAATTTTGGGAACCAGACGTCAAAAAGTCTGAAAGCTGAGGTCAAGACATTGGCTAAGATTAGGCATAAGAATGTTGTAAAAATCCTGGGGTTTTGCCATTCTGATGAGTCAATCTTTCTCATTTATGAGTACTTGCAAGAAGGAAGCTTAGGGGACTTGATTTCCCGTGAGGATTTTGAGTTGGAGTGGGAGGCAAGATTGAGGATTGCCATCAGGGTTGCTCAAGCACTAGCCTATCTTCACAATGACTATGTTCCTCACTTGCTTCACAGAAACGTTAAGTCCAGGAACATTCTTCTGGATGCAAACTTTGAGCCAAAACTCACAGATTTTGCACTTGATCGAATTGTGGGAGAAGCCGCATTTCAGTCAACTGTTGCTTCTGAAGCAGCATCTTCCTGCTATAATGCTCCAGAATATGGGTACAGTAAGAAAGCAACTGAAGAATTGGACATATACGGCTATGGTGTTATATTGCTAGAGCTTGTGACTGGGAAGCAAGCAGAGCAAGCAGTATCAACAGAGTCTCTGGACATAGTGAAGTGGGTTCGAAGGAGAGTGAACATCACTGATGGGGTGCATCAAGTACTTGATCCCAAAATATCACATTCCAATCAGCAAGAAATGATTAGAGCCCTGGAAACCGCTCTTCGTTGCACTTCCGTGGTGCCAGGAAAAAGACCATCGATGGTTGAAGTTGTACGAGCTCTTCAGTCCCTTGAGTCACAAACCATCGCTGCAAATTCTCAGGATTCGAATGAGGAACCCTCGATTCCAATATGA 3093 0.43 MECHGHKTIWLENKFTYLTTTRGRKFSGEIFEKKQKMINEMWSISTVNNNNMYESVTIVLYVCARDISKFPLLILCSALKTHFLDFLLFWGQWIDGFCAGSSFWRDLVHHRRSLISTQSHSTLSDIYEERVENTTKQALLIPHTELMATLCTYLFLLSVTLSTFNLGSSSSSSEADILLSFKASIEDSRNALSSWSNTSSTHYCNWTGIACSTASPLSLTSINLQNLNLSGDLSSSICDLPNLSYLNLADNIFNQPIPLHLSQCSSLETLNLSNNLIWGTIPMQISQFGSLRVLDFSRNHIEGDIPESLGSLKNLEVLSMGSNLLSGDVPAIFMNLTRLAVLDLSENPYLESEIPEGIGELGSLKQLLLQSSGFHGEIPDSFANLRSLTHLDLSQNNLTGEIPQGLVSSLKNLVSFDVSQNKLSGSFPNGICNAKGLINLSLHTNIFGGPIANTIGECKNLERFQVQNNQLTGNFPYSLWSSPKVKLVRAENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPQSLGLVKSLYRFSASLNRFYGELPVNFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLTGQIPLSLAELPVLTYLDLSANNLTGSIPLGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPELCGPGLPTSCSDDPQRHHSGGLTALACALISVAFVIGTAMFVGGFILYRKSSKRNQIGVWRSVFFYPLRITEQDLLIGMDEKSLIGNGGVFGKVYIVSLPSGEQVAVKKLVNFGNQTSKSLKAEVKTLAKIRHKNVVKILGFCHSDESIFLIYEYLQEGSLGDLISREDFELEWEARLRIAIRVAQALAYLHNDYVPHLLHRNVKSRNILLDANFEPKLTDFALDRIVGEAAFQSTVASEAASSCYNAPEYGYSKKATEELDIYGYGVILLELVTGKQAEQAVSTESLDIVKWVRRRVNITDGVHQVLDPKISHSNQQEMIRALETALRCTSVVPGKRPSMVEVVRALQSLESQTIAANSQDSNEEPSIPI 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1523 1030 Pfam Leucine rich repeat N-terminal domain 172 212 IPR013210 -
Lele13g1523 1030 SUPERFAMILY Protein kinase-like (PK-like) 741 1007 IPR011009 -
Lele13g1523 1030 FunFam Leucine-rich repeat family protein 173 330 - -
Lele13g1523 1030 Pfam Protein kinase domain 740 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1523 1030 Gene3D Ribonuclease Inhibitor 407 672 IPR032675 -
Lele13g1523 1030 Gene3D Ribonuclease Inhibitor 171 331 IPR032675 -
Lele13g1523 1030 SMART LRR_typ_2 336 361 IPR003591 -
Lele13g1523 1030 SMART LRR_typ_2 288 312 IPR003591 -
Lele13g1523 1030 SMART LRR_typ_2 240 264 IPR003591 -
Lele13g1523 1030 SMART LRR_typ_2 601 624 IPR003591 -
Lele13g1523 1030 SMART LRR_typ_2 385 409 IPR003591 -
Lele13g1523 1030 SMART LRR_typ_2 410 434 IPR003591 -
Lele13g1523 1030 Pfam Leucine rich repeat 363 423 IPR001611 GO:0005515
Lele13g1523 1030 Pfam Leucine rich repeat 290 347 IPR001611 GO:0005515
Lele13g1523 1030 ProSiteProfiles Protein kinase domain profile. 739 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1523 1030 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 815 1015 - -
Lele13g1523 1030 PRINTS Leucine-rich repeat signature 388 401 - -
Lele13g1523 1030 PRINTS Leucine-rich repeat signature 601 614 - -
Lele13g1523 1030 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Lele13g1523 1030 Gene3D Ribonuclease Inhibitor 332 406 IPR032675 -
Lele13g1523 1030 Gene3D Phosphorylase Kinase; domain 1 732 814 - -
Lele13g1523 1030 SUPERFAMILY L domain-like 170 446 - -
Lele13g1523 1030 Gene3D Transferase(Phosphotransferase) domain 1 815 1027 - -
Lele13g1523 1030 SUPERFAMILY L domain-like 353 643 - -
Lele13g1523 1030 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 729 814 - -
Lele13g1523 1030 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 408 672 - -
Lele13g1523 1030 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 155 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1523 Lele-ChrLele13 24492530 24497402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1523 178 1010 Receptor kinase-like Gene Family AT5G06940 63.604 0.0 1047
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g1523 Pkinase 1.7e-38 CL0016