Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1522 ATGGAAGGCTGTCGAACTAGAACTATGGTGGACATGGAAGGCTGCCAGACCAAAATCATGGTGAAAACGGAAGGTGCCGACCCTCCTACATTTTACTACTTTTCTGGCTCCGTTGCCTCTGCCCTCTGTTGCTGTGTTTCACGCGGTTCTGGTGTCTCTGGTGTTCGATTTCTACGACTATTTTCATTCGCCCTTATAGGTGGTCAAAAAATAATGGAGTCTCATGATGAGACAGGATGCCAGGCACCAGATCGCACCATTCTTTGTATCAACAATTGTGGCTTCTTTGGCAGAGCTGCTACCATGAATATGTGCTCCAAATGTTACAAGGACATGCTGTTGAAGCAGGATCAGGCAAAACTTGCAGCATCATCAGTTGAAAACATTGTGAATGGGAGCTCTAGCAGCAGCAGTGGGAAAGAGGCTACCACTGTGTGTTCTACTGATGTACAAATTGGAACTGTGGAGGTCAAGACAATACACACAGAAATCTGTCAGGATTCATCCTCTAGTGAGAGCTTAGAGATGAAAGTCAAGATTGGTCCCAGTAGATGTACCACTTGCCGGAAGCGTGTTGGATTAACTGGTTTTAGCTGCAAATGTGGGAACATTTTCTGTGCATTGCATCGCTATTCTGACAAACACAATTGCCCTTTTGATTATCGGACAGTTGGTCAGGATGCTATAGTTAAAGCCAACCCTGTTGTTAAAGCAGAAAAGCTTGACAAAATCTAG 735 0.4476 MEGCRTRTMVDMEGCQTKIMVKTEGADPPTFYYFSGSVASALCCCVSRGSGVSGVRFLRLFSFALIGGQKIMESHDETGCQAPDRTILCINNCGFFGRAATMNMCSKCYKDMLLKQDQAKLAASSVENIVNGSSSSSSGKEATTVCSTDVQIGTVEVKTIHTEICQDSSSSESLEMKVKIGPSRCTTCRKRVGLTGFSCKCGNIFCALHRYSDKHNCPFDYRTVGQDAIVKANPVVKAEKLDKI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1522 244 FunFam Zinc finger AN1-type containing 6 158 240 - -
Lele13g1522 244 PANTHER AN1-TYPE ZINC FINGER PROTEIN 87 244 - -
Lele13g1522 244 ProSiteProfiles Zinc finger A20-type profile. 83 117 IPR002653 GO:0003677|GO:0008270
Lele13g1522 244 SMART AN1_Zf_4 185 222 IPR000058 GO:0008270
Lele13g1522 244 ProSiteProfiles Zinc finger AN1-type profile. 179 225 IPR000058 GO:0008270
Lele13g1522 244 Gene3D - 72 141 - -
Lele13g1522 244 SUPERFAMILY AN1-like Zinc finger 175 239 IPR035896 -
Lele13g1522 244 Pfam A20-like zinc finger 87 110 IPR002653 GO:0003677|GO:0008270
Lele13g1522 244 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 88 126 - -
Lele13g1522 244 SMART A20_3 86 110 IPR002653 GO:0003677|GO:0008270
Lele13g1522 244 Pfam AN1-like Zinc finger 185 221 IPR000058 GO:0008270
Lele13g1522 244 Gene3D - 157 240 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1522 Lele-ChrLele13 24485844 24488859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1522 76 244 C2H2 Transcription Factor Family AT3G52800 42.690 5.53e-39 131