Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1511 ATGGTCTTACCGCTGGAAATTGCAGAGGAGCCTGTTTACGTGAATGCCAAGCAATACCATGGAATTTTAAGGCGTAGGCGATTACGTGCTAAGGCTGAGCTGGAAAGGAAGCTAATAAAAGGAAGGAAGCCTTACCTTCACGAATCTCGACATTTGCATGCAATGAGAAGAGCCAGAGGATGTGGCGGCCGTTTCCTGAACACAAAGAAGCTTAATGATACAGCTTCTGCCAACACTAGAACCAACAACGAGGATGCTGCTACTTCTGACCTTAATGATACCCTTTCTCCTGATTCAAACTCAACTTCTAATAAAAACAAGCAGTGCTCACACTTTCAGGGATTTGATCTTGAAGGCGACTTCTCGGCACAGAAGGCTAAATCGCTCAATCACGCTCGGATTGGCAGAGTCCTCACCATTAATTAA 426 0.4507 MVLPLEIAEEPVYVNAKQYHGILRRRRLRAKAELERKLIKGRKPYLHESRHLHAMRRARGCGGRFLNTKKLNDTASANTRTNNEDAATSDLNDTLSPDSNSTSNKNKQCSHFQGFDLEGDFSAQKAKSLNHARIGRVLTIN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1511 141 ProSiteProfiles NF-YA/HAP2 family profile. 8 68 IPR001289 GO:0003700|GO:0006355
Lele13g1511 141 MobiDBLite consensus disorder prediction 69 107 - -
Lele13g1511 141 ProSitePatterns NF-YA/HAP2 subunit signature. 13 33 IPR018362 GO:0003677|GO:0016602
Lele13g1511 141 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 1 115 IPR001289 GO:0003700|GO:0006355
Lele13g1511 141 MobiDBLite consensus disorder prediction 65 107 - -
Lele13g1511 141 Gene3D - 8 69 - -
Lele13g1511 141 SMART cbf3 7 68 IPR001289 GO:0003700|GO:0006355
Lele13g1511 141 PRINTS CCAAT-binding transcription factor subunit B signature 11 33 IPR001289 GO:0003700|GO:0006355
Lele13g1511 141 PRINTS CCAAT-binding transcription factor subunit B signature 42 65 IPR001289 GO:0003700|GO:0006355
Lele13g1511 141 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 10 65 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1511 Lele-ChrLele13 24391279 24392222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1511 1 137 CCAAT-HAP2 Transcription Factor Family AT3G20910 48.980 1.38e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lele13g1511 CBFB_NFYA 5.2e-26 No_clan