Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1501 ATGGGGTTTCGTTTCTGTTCTCGATCATTAAAACTGAGATTACTGAAAATAACGGAGTTTTGTTTTTGTAAGCCTTTTACGAGTGATCTGTGGTTGCAAAGAAGCTCGGAATCTTCATCGACGGAGGGAGAACATTGTACGATGATGGTTCTGCGCTTGTTGTGTCTTGTGGTTGCCTGGTATGTGTCAAAATCCGGTCTTTTAGTTCTGGGTGATGAGCTACAGGATCAAACTATACTGCTGGCCCTTAACCAAGAGCTTAAAGTACCAAGATGGGACGCCAACAACTCAAGGTACTGCTCTTGGCAAGGTGTTAGCTGCAATGACCACTCAATGGTAGTGAAGCTCGATCTGTCTCGTGCAAACCTCCGAGGTAATATCACTCTAGTGTCCCAGCTCAAAGCTCTTAGGCAGCTTGACCTTTCAAATAACAATTTTCATGGTTACATTCCTCCGGCTTTTGGAAATTTATCTGATCTTGAAGTTCTCGATTTGTCTTCAAATAAGTTCGAAGGTTCAATTCCACCAAAATTGGGCGTCCTCAGAAATCTTATATCGTTAAACCTTTCCAACAACTTGCTTGTGGGGAAAATACCAAGTGAACTTCATGGTCTAGAGAAATTGCAAGAGTTTCAAGTCTCCAGTAATCAATTGAATGGATCTCTACCTACTTGGCTGGGAAACTTAACCAGTCTGACAGTTTTGGCTGCCTATGAGAATCTTCTAGGGGGCATGATTCCGGACAATCTTGGGCTGGCTTCTGAGCTTGAAATTCTTAACCTGCATTCAAACCAGCTTGATGGCCCCATACCGGCAAGCATTTTTACTTCAGGAAAGCTGGAAGTTCTGGTTCTGACCCAGAACAATTTGAGTGGTGATCTCCCTCAAGAAATCGGGAATTGCCAAGGCCTTTCCAATATCCGAATTGGGAACAACCATCTAGTAGGTACAATTCCAAAGACCATCGGAAACATTAGTAGTCTTACCTACTTTGAAGCAGACAATAACAATCTTTCTGGGGAGGTAGTGTCTAAGTTTTCTCAGTGTTCAAATCTCACCCTTCTCAACTTAGCTTCGAATGGATTCAGTGGAACGATTCCACCAGAAATTGGACAGCTTATGAACCTGCAGGAACTAATTCTTTCTGGAAATAGCCTATTTGGAAATATTCCAGAACCAATTTTGAGGTGCAGGAATCTTAACAAGCTTGATATAAGCAATAACAGGTTCAATGGAACACTCCCAAATGACATCTGCAAATTGTCTAGGCTGCAGTTCTTGCTATTGGGTCAAAATTCTATAGGAGGGGAGATCCCTCATGAAATTGGAAATTGTGCAAAACTTCTTGAGTTGCAAATGGGCAGTAACTATTTGACAGGATTTATCCCTCCTGAGATTGGTCACATTAGGAACTTGCAGATTGCTTTAAATTTGAGCTTCAATCATCTTCATGGATCACTGCCTCCTGAGTTAGGAAGACTGGACAAACTTGTCTCTCTGGATGTTTCAAACAACAGGCTCTCAGGCAATATCCCAGCTGAGCTGAAGGGTATGTTGAGCTTGATAGAGGTTAACTTTTCAAATAATTTGCTCAGCGGCCCAGTACCAACATTCGTGCCATTCCAAAAGAGTCCCAATTCAAGTTTTATGGGTAATAAAGCGCTCTGTGGAGAGCCATTAAGCTCTTCATGTGGAGATCTTTATGATGACAGCAATAATTACCATCACAGAGTTTCTTACAGAATCATACTTGCAGTAATCGGTTCTGGTTTGGCAGTTTTTATGTCAGTTACTGTGGTGGTCTTGCTGTTTATGCTTAGGGAGAGGCAAGAAAAGGCAGCCAAAGATGCCGGCATGGTTGAAGACGAAGCTAATAACAAACCAACCATAGTAGCAGGGAGTGTCTTTGTTGAGAATCTAAGACAAGCAGTAGACCTTGATGCTGTTGTTAAGTCAACCCTCAAAGATTCTAATAAGCTCAGCAGTGGTACTTTCAGTACAGTTTACAAGGCAGTCATGCCTTCTGGGATGGTTTTATCTGTTCGGAGACTCAAATCCATGGATAAGACAATAATCCACCACCAAAACAAGATGATTAGGGAACTTGAGAGGCTGAGCAAACTCTCTCATGACAATCTGGTTCGACCCATCGGATATGTTATTTATGAAGATGTTGCTCTTCTCTTGCATCATTTCTTACCCAATGGAACATTGGCTCAGTTTCTTCATGAATCTAGCAAGCAACCTGAATATCAACCCGACTGGCCTACTAGATTATCCATTGCCATCGGAGTCGCAGAAGGTCTGGCTTTCCTGCATCATGTGGCAATTATCCATCTTGACATTTCTTCTGGCAATGTTCTTTTGGATGCAAATTTCAAGCCTTTGCTTGGGGAGATTGAGATATCAAAACTTCTGGATCCAACCAGAGGTACCGCGAGTATTAGTGCTGTTGCTGGTTCCTTTGGATACATACCACCAGAATATGCATATACAATGCAAGTTACAGCACCTGGCAATGTCTACAGTTATGGTGTAGTTCTCCTTGAGATCCTGACGACACGACCACCGGTTGATGAGGATTTCGATGAGGGCATAGATTTGGTGAAGTGGGTTCATAGTGCTCCAGTAAGAGGGGAAACTCCAGAGCAGATACTCGATGCAAGGCTAAGCACAGTATCATTTGGTTGGAGGAAAGAAATGCTTGCCGCTTTGAAGGTTGCATTGCTCTGCACTGATACTACACCTGCAAAACGACCTAAGATGAAGAAGGTAGTGGAAATGCTCCAAGAAATAAGGCAAAACTGA 2808 0.4259 MGFRFCSRSLKLRLLKITEFCFCKPFTSDLWLQRSSESSSTEGEHCTMMVLRLLCLVVAWYVSKSGLLVLGDELQDQTILLALNQELKVPRWDANNSRYCSWQGVSCNDHSMVVKLDLSRANLRGNITLVSQLKALRQLDLSNNNFHGYIPPAFGNLSDLEVLDLSSNKFEGSIPPKLGVLRNLISLNLSNNLLVGKIPSELHGLEKLQEFQVSSNQLNGSLPTWLGNLTSLTVLAAYENLLGGMIPDNLGLASELEILNLHSNQLDGPIPASIFTSGKLEVLVLTQNNLSGDLPQEIGNCQGLSNIRIGNNHLVGTIPKTIGNISSLTYFEADNNNLSGEVVSKFSQCSNLTLLNLASNGFSGTIPPEIGQLMNLQELILSGNSLFGNIPEPILRCRNLNKLDISNNRFNGTLPNDICKLSRLQFLLLGQNSIGGEIPHEIGNCAKLLELQMGSNYLTGFIPPEIGHIRNLQIALNLSFNHLHGSLPPELGRLDKLVSLDVSNNRLSGNIPAELKGMLSLIEVNFSNNLLSGPVPTFVPFQKSPNSSFMGNKALCGEPLSSSCGDLYDDSNNYHHRVSYRIILAVIGSGLAVFMSVTVVVLLFMLRERQEKAAKDAGMVEDEANNKPTIVAGSVFVENLRQAVDLDAVVKSTLKDSNKLSSGTFSTVYKAVMPSGMVLSVRRLKSMDKTIIHHQNKMIRELERLSKLSHDNLVRPIGYVIYEDVALLLHHFLPNGTLAQFLHESSKQPEYQPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRPPVDEDFDEGIDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDTTPAKRPKMKKVVEMLQEIRQN 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1501 935 Pfam Leucine rich repeat N-terminal domain 77 108 IPR013210 -
Lele13g1501 935 Gene3D Ribonuclease Inhibitor 217 321 IPR032675 -
Lele13g1501 935 Gene3D Transferase(Phosphotransferase) domain 1 733 935 - -
Lele13g1501 935 Pfam Protein tyrosine and serine/threonine kinase 657 929 IPR001245 GO:0004672|GO:0006468
Lele13g1501 935 Gene3D Phosphorylase Kinase; domain 1 619 732 - -
Lele13g1501 935 SUPERFAMILY L domain-like 88 342 - -
Lele13g1501 935 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 74 222 - -
Lele13g1501 935 SUPERFAMILY L domain-like 311 561 - -
Lele13g1501 935 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 55 931 - -
Lele13g1501 935 ProSiteProfiles Protein kinase domain profile. 654 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1501 935 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 624 732 - -
Lele13g1501 935 SUPERFAMILY Protein kinase-like (PK-like) 649 932 IPR011009 -
Lele13g1501 935 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 273 567 - -
Lele13g1501 935 CDD STKc_IRAK 660 932 - -
Lele13g1501 935 Gene3D Ribonuclease Inhibitor 325 571 IPR032675 -
Lele13g1501 935 SMART LRR_typ_2 157 179 IPR003591 -
Lele13g1501 935 SMART LRR_typ_2 494 517 IPR003591 -
Lele13g1501 935 SMART LRR_typ_2 421 445 IPR003591 -
Lele13g1501 935 SMART LRR_typ_2 133 156 IPR003591 -
Lele13g1501 935 SMART LRR_typ_2 205 229 IPR003591 -
Lele13g1501 935 SMART LRR_typ_2 373 397 IPR003591 -
Lele13g1501 935 SMART LRR_typ_2 181 204 IPR003591 -
Lele13g1501 935 SMART LRR_typ_2 254 277 IPR003591 -
Lele13g1501 935 ProSitePatterns Tyrosine protein kinases specific active-site signature. 777 789 IPR008266 GO:0004672|GO:0006468
Lele13g1501 935 Gene3D Ribonuclease Inhibitor 73 216 IPR032675 -
Lele13g1501 935 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 733 935 - -
Lele13g1501 935 Pfam Leucine rich repeat 135 194 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1501 Lele-ChrLele13 24336750 24340558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1501 56 934 Receptor kinase-like Gene Family AT2G41820 72.562 0.0 1286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g1501 PK_Tyr_Ser-Thr 5.6e-28 CL0016