Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1495 ATGGCTTCTTCTTCCTCTGATCCTCCCGCCAAGTCCGAGCTTGGCTCCGCCATGCCAGAGACTTCGGAAGCAGCCATCACCCACGATCAGGTGTCCTTATACAGGGATTTCAAGAAGGCGAAGAAAGAGAGAGGATGTACGGCCAAAGATCGAATCAGCAAAATGCCTCCTTGTGCTGCCGGTAAACGCAGCTCAATATATCGTGGTGTCACCAGGCATAGATGGACTGGTCGTTATGAGGCACATCTTTGGGATAAGACCACGTGGAACCAAAATCAGAATAAGAAAGGAAAGCAAGGGGCATATGATGATGAAGAGGCTGCAGCTAGAGCTTATGACCTTGCGGCTCTAAAATATTGGGGTCCTGGCACTCTCATTAATTTTCCAGTGTCTGATTATACAAGAGATCTTGAAGAAATGCAGAATTTTTCAAGAGAAGAATACCTAGCATCTTTACGACGAAAGAGCAGTGGATTTTCAAGAGGACTCTCAAAATATCGTGGACTTTCCAGTCGATGGGAACCATCGTATGGTCGCACGTCTGGATCTGACTACTTCAATAGCATGCATTATGGTGATGATTCAGCTGCAGAAAGTGAATATTTAAGTAGTTTCAGTGTAGACAGAAAGATTGATTTAACAAGTTACGTCAAGTGGTGGGGATCTAATAACAAGAGTGGTCGCCAAGCTGATGCTGGAATAAAATCATCAGAAGAAGAAAAAAAGCGCAGTTTTGGTGGAGATCATTTCAGTGAACTCAGAACATTGGAACAGCAAGAACAGCCTACTGAACCATATCAGATGCCACTGTTAGGCACGTCCCATGATGAAAAGAAACATAAGAATACTTCAGTTTCTGCCTTAAGTATCTTGTCTCGATCAACTGCTTACAAGAGCTTGCTAGAGAAAGCATCAAAGAGAGAAGAAAATAGCAGTACTGACCCTAATGAAAATGACAACAAAAATAGCATCTGTAAGTTGGACCGTGGCAAGGCGGTGGAGAAATCATCGGATCATGGTGGCGGCGATGGAAGAACTGAATCTGTAATGGGGATGAGTGGGGCTTTGTCTCTTCAAAAGAATGTTTACAACAACCCAGTGGCTCCATTCCTGTCTGCACCACTTTTGACTGCTTATAATGCTATGGATCCCTTAGTAGATCCTCTTCTCTGGACTTCTCTTGCTCCTATGCTTCCTGCTGGCCTTTCCCGTAATGCTCAGGTTACCAAGACTGAGGGCAGTCCATCTTATGCCGTGTTTCAGGCGGAGAAGTGA 1275 0.4463 MASSSSDPPAKSELGSAMPETSEAAITHDQVSLYRDFKKAKKERGCTAKDRISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKTTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYTRDLEEMQNFSREEYLASLRRKSSGFSRGLSKYRGLSSRWEPSYGRTSGSDYFNSMHYGDDSAAESEYLSSFSVDRKIDLTSYVKWWGSNNKSGRQADAGIKSSEEEKKRSFGGDHFSELRTLEQQEQPTEPYQMPLLGTSHDEKKHKNTSVSALSILSRSTAYKSLLEKASKREENSSTDPNENDNKNSICKLDRGKAVEKSSDHGGGDGRTESVMGMSGALSLQKNVYNNPVAPFLSAPLLTAYNAMDPLVDPLLWTSLAPMLPAGLSRNAQVTKTEGSPSYAVFQAEK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1495 424 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Lele13g1495 424 PRINTS Ethylene responsive element binding protein signature 111 131 IPR001471 GO:0003700|GO:0006355
Lele13g1495 424 MobiDBLite consensus disorder prediction 232 255 - -
Lele13g1495 424 MobiDBLite consensus disorder prediction 302 348 - -
Lele13g1495 424 Gene3D AP2/ERF domain 66 131 IPR036955 GO:0003700|GO:0006355
Lele13g1495 424 MobiDBLite consensus disorder prediction 226 285 - -
Lele13g1495 424 Pfam AP2 domain 66 121 IPR001471 GO:0003700|GO:0006355
Lele13g1495 424 MobiDBLite consensus disorder prediction 1 27 - -
Lele13g1495 424 MobiDBLite consensus disorder prediction 302 342 - -
Lele13g1495 424 FunFam AP2-like ethylene-responsive transcription factor 65 131 - -
Lele13g1495 424 SMART rav1_2 66 135 IPR001471 GO:0003700|GO:0006355
Lele13g1495 424 ProSiteProfiles AP2/ERF domain profile. 66 129 IPR001471 GO:0003700|GO:0006355
Lele13g1495 424 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 35 303 - -
Lele13g1495 424 SUPERFAMILY DNA-binding domain 65 131 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1495 Lele-ChrLele13 24293015 24296171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1495 29 408 AP2-EREBP Transcription Factor Family AT2G41710 59.694 2.31e-144 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele13g1495 AP2 2e-09 CL0081