Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1494 ATGATGATGATGGATGGAGTGAAGAATAATAAAGAGTCGTTGGATCAGTCACATGCGAGAAAGTCGAACCCACCACCCTTCTTGTTAAAGACATACATGCTGGTGGAGGATCCGGCGACCGACAGCGTCATATCGTGGAACGACGACGGCACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCGCGTGACCTTCTTCCTACTCTCTTCAAGCACAGCAACTTCTCCAGCTTTGTTCGCCAGCTGAATACCTATGGGTTTCGTAAAGCGGCAACGAACAGATGGGAATTTTGCAACAACAAGTTTAGGAAGGGGGAGAAAGAAAAACTGAGTGAGATTAGACGAAGAAAGGCGTGGGCGAACAGGCAGCAGCAGCAACAACAACCAGAAGGATCAACACAGGCAAATCATCAGGAATATTCTGAGGAAGAGCAAAGGTCTTCTTCAACCTCTTCGTCTTGTGGATATTCCAGTCTCGTAGATGAAAACAAGAGACTGAGGAGAGAGAACGGGGCATTGAGCTCTGAGCTGGCGGCCATGAAGAGGAAGTGCAGGGAGCTGCTGGAGCTAGTGGCTAAGCATGCCAAGAAAAATGAGGAAGAAGACGAAAGGCCTATGTTATTTGGAGTGAGGCTCGATGTGAACCAAGGACAGAGAGATTTGAAGACCAAGACAAGCCCCAGTATTTTAATGCCCCAGTCATGCAAATAA 711 0.4866 MMMMDGVKNNKESLDQSHARKSNPPPFLLKTYMLVEDPATDSVISWNDDGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKAATNRWEFCNNKFRKGEKEKLSEIRRRKAWANRQQQQQQPEGSTQANHQEYSEEEQRSSSTSSSCGYSSLVDENKRLRRENGALSSELAAMKRKCRELLELVAKHAKKNEEEDERPMLFGVRLDVNQGQRDLKTKTSPSILMPQSCK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1494 236 Pfam HSF-type DNA-binding 27 116 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele13g1494 236 SMART hsfneu3 23 116 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele13g1494 236 MobiDBLite consensus disorder prediction 120 136 - -
Lele13g1494 236 SUPERFAMILY "Winged helix" DNA-binding domain 22 116 IPR036390 -
Lele13g1494 236 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele13g1494 236 PRINTS Heat shock factor (HSF) domain signature 27 50 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele13g1494 236 PRINTS Heat shock factor (HSF) domain signature 78 90 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele13g1494 236 Coils Coil 156 197 - -
Lele13g1494 236 FunFam Heat stress transcription factor B-4 19 117 - -
Lele13g1494 236 MobiDBLite consensus disorder prediction 116 157 - -
Lele13g1494 236 MobiDBLite consensus disorder prediction 1 22 - -
Lele13g1494 236 Gene3D - 18 118 IPR036388 -
Lele13g1494 236 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 196 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1494 Lele-ChrLele13 24290076 24291065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1494 24 194 HSF AT2G41690 60.000 1.12e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele13g1494 HSF_DNA-bind 2.7e-31 CL0123