Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1450 ATGAAATCTGGTCGGATCTTGCTTTTATCGGATGTGGATTTTGTTCAAATGGGAATGGACCCGGAGTCCCAATTTCATGTTTTGGCTGTAGATGACAGCCTCATAGACCGGAAGCTGATTGAGAGGCTGCTCAAGACCTCCTCCTATCAAGGTTTGCTCATCTTAATGGACTCTGTTTCCTCAATAACAGTTACTACGGTGGATTCCGGTAGCAAGGCTCTGGAGTTCCTGGGCTTGCGCGACAATGAACAGATCGACCCCAGCACGCCATCGGTTTCTCCTGGCAATCATCAGGAAGTGGAGGTGAATCTTATTATTACAGACTACTGTATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCGTCGTCTTTGAGAAACATACCGGTGGTGATTATGTCGTCGGAGAATGTACCTTCAAGAATCAGCAGATGCTTGGAGGAAGGAGCAGAGGAGTTTTTTCTCAAGCCAGTGAGGCTTTCAGATTTGAATAAGCTTCGACCCCATTTGATGAAGACGAAGTTGGAAGAACAAAAGCCTGAAGAACCAGAAATTCCTCAAAACCCACAAGTTCAACAAGAAAAACAAATTGATGGGCAACAACCCACATCACAGCCACAACTAGATCATCAACAACAACCGCAATCGCCACAAGCCGCCAGTAATAACAAGAGAAAGGCCATAGAACAACAGGGGATTTCACCTGAGAATGACAGAACGAGACCTAGATACAGTGACATAGCCACAGCGGTGTGA 768 0.4557 MKSGRILLLSDVDFVQMGMDPESQFHVLAVDDSLIDRKLIERLLKTSSYQGLLILMDSVSSITVTTVDSGSKALEFLGLRDNEQIDPSTPSVSPGNHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLRPHLMKTKLEEQKPEEPEIPQNPQVQQEKQIDGQQPTSQPQLDHQQQPQSPQAASNNKRKAIEQQGISPENDRTRPRYSDIATAV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1450 255 Gene3D - 26 245 - -
Lele13g1450 255 CDD REC_typeA_ARR 27 170 - -
Lele13g1450 255 Pfam Response regulator receiver domain 98 169 IPR001789 GO:0000160
Lele13g1450 255 MobiDBLite consensus disorder prediction 189 242 - -
Lele13g1450 255 MobiDBLite consensus disorder prediction 178 255 - -
Lele13g1450 255 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 226 IPR045279 GO:0009736
Lele13g1450 255 SUPERFAMILY CheY-like 24 179 IPR011006 -
Lele13g1450 255 ProSiteProfiles Response regulatory domain profile. 26 175 IPR001789 GO:0000160
Lele13g1450 255 SMART REC_2 25 171 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1450 Lele-ChrLele13 24034759 24036422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1450 17 255 Response Regulator Gene Family AT3G57040 60.558 4.31e-93 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele13g1450 Response_reg 2.4e-15 CL0304