Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1446 ATGTTGGCTTTATCGCCTTCTCTGTTCGCACCCATTGAGTGGGCCTTGGAGGAACCCACAAGTCACAATGATCCCAACTTGTTTTACAAAGACGGAACTAGTCTTCAGTTCAGTTGCTCCCCACCAGATCATCAGGTTCAGGTCGAAGTTGAGGAGAATCAGAGATCTGCGCCAATATCCCTTGCCAAAAGCGGCGACCCTACCATGGTCATCAAAAAGCTTAGCCACAATGCTAGTGAACGCGATCGTCGCAAGAAGATCAACAGCTTGTATTCATCACTTCGTTCTATGCTTCCTTTGCCTGATAAAAAGAAAAAGTTGAGCATTCCGGCAACAATTTCACGAGTACTAAAGTACATCCCCGAGTTACAGCAGCAAGTGGAAGAGCTAGTCAAGAAAAAGGAGGAGCTTTTGTTGAGAATCTCTGCGCAAGGAGATGCGTCAAGAAAAGAATCTCGATGGAAAATGGCTCATCAATACGATGCCACTGCTTGCGTAGTTTCAACAAGCAGGCTCAATGATAAAGAAGCTGTTATTCAGATTTCCTCTGACAAGCTCCACAAAACTCCTTTTTCAGAGATATTGCTGTGCTTAGAAAAGGAAGGGCTTTTACTTTTAAATGCTTCCACCTTTGAGACTTTTGGACAACGGGCCCTCTATAACGTGCATTTGCAGACGGATGAAACGTGTAGAATAGAGCCAGAAATTCTAAGCGAGAAGATTTTGTCAATATATGAGAGGAAGGAGGGGAATTTTCTATGTTTTCAAATAAGATGA 777 0.4337 MLALSPSLFAPIEWALEEPTSHNDPNLFYKDGTSLQFSCSPPDHQVQVEVEENQRSAPISLAKSGDPTMVIKKLSHNASERDRRKKINSLYSSLRSMLPLPDKKKKLSIPATISRVLKYIPELQQQVEELVKKKEELLLRISAQGDASRKESRWKMAHQYDATACVVSTSRLNDKEAVIQISSDKLHKTPFSEILLCLEKEGLLLLNASTFETFGQRALYNVHLQTDETCRIEPEILSEKILSIYERKEGNFLCFQIR 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1446 258 Pfam Helix-loop-helix DNA-binding domain 72 124 IPR011598 GO:0046983
Lele13g1446 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Lele13g1446 258 FunFam Transcription factor ORG2 67 152 - -
Lele13g1446 258 CDD bHLH_AtORG2_like 72 144 - -
Lele13g1446 258 SMART finulus 77 129 IPR011598 GO:0046983
Lele13g1446 258 Coils Coil 120 140 - -
Lele13g1446 258 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 242 IPR015660 -
Lele13g1446 258 Gene3D - 68 152 IPR036638 GO:0046983
Lele13g1446 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 141 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1446 Lele-ChrLele13 23995906 23997083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1446 1 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.923 2.25e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele13g1446 HLH 1.7e-12 No_clan