Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1445 ATGTTGGTTTTATCGCCTTCTCTGTTGGTACCCACTGAGTGGGCCTTAGAGGAACCCACAAGTCATATTGATCCCAACTTGGTTTACAAAGACGGAGCTACTCTTCACCAGTCTAGTTGCTCGCCACCAAATCATCAGGTTGAGTTTGAGGTTGAGGAGGCTCAGAGATCTGCGCCGATATCCCCTGCCGTAAGCGGCGACCCTACCATGGTCAAAAAGCTTAACCACAATGCCAGTGAACGCGATCGTCGCAAGAAGATCAATAGCTTGTATTCCTCACTTCGTTCTATGCTTCCTTTGTCTGATCAAACGAAGAAGTTAAGCATTCCGGCAACAATTTCACGAGTCCTAAAGTACATACCGGACTTACAGAAGAGTGTGGAAGTGCTTCTCAAGAAAAAGGAGGAGCTTTTGTTGACAATCTCTCGGCAAGGAGATGTGTCAAGAAAAGAATATCGAAGGGAAATGGCCCATCACTACGCCGCCACTGCCTGCGTAGTTTCAACAAATAGGCTCAATGATAACGAAGCTGTTATTCAGATTTCCTCTTACAAGCTCCACAAAACTCCTTTTTCAGAGATATTGCTGTGTTTAGAAAAGGAAGGGCTTTTACTGCTAAATGCTTCCACATTTGAGACCTTTGGACAGCGTGTCTTCTATAACTGGCATTTTCAGATGGATGAAACGTGTAGAATAGAGCCAGAAATTCTAGCTAAAGTTTTGAAATCCATCGTCCTCTTCATACTAGCAGTGCTTGTATTGGCATCAAACTCTGTTGATGGCAAACATTTTTGCAAAGCAGATTGGAAATGGATCGATCAGTCGTCTGACACGTGGACCTCATTTCAGCTACAAAGTCATCAGATGATATCAATCGAACCTTTTCTGGATAAAGAGGGAGTTTTACCGTTCTTGTATCGGACAGAGTTGTATATAAGAAATGATAAGTGA 951 0.4322 MLVLSPSLLVPTEWALEEPTSHIDPNLVYKDGATLHQSSCSPPNHQVEFEVEEAQRSAPISPAVSGDPTMVKKLNHNASERDRRKKINSLYSSLRSMLPLSDQTKKLSIPATISRVLKYIPDLQKSVEVLLKKKEELLLTISRQGDVSRKEYRREMAHHYAATACVVSTNRLNDNEAVIQISSYKLHKTPFSEILLCLEKEGLLLLNASTFETFGQRVFYNWHFQMDETCRIEPEILAKVLKSIVLFILAVLVLASNSVDGKHFCKADWKWIDQSSDTWTSFQLQSHQMISIEPFLDKEGVLPFLYRTELYIRNDK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1445 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Lele13g1445 316 FunFam Transcription factor ORG2 67 152 - -
Lele13g1445 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 140 IPR036638 GO:0046983
Lele13g1445 316 CDD bHLH_AtORG2_like 72 125 - -
Lele13g1445 316 Gene3D - 67 155 IPR036638 GO:0046983
Lele13g1445 316 Pfam Helix-loop-helix DNA-binding domain 72 124 IPR011598 GO:0046983
Lele13g1445 316 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 59 242 IPR015660 -
Lele13g1445 316 SMART finulus 77 129 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1445 Lele-ChrLele13 23990579 23992859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1445 49 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 47.283 5.93e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele13g1445 HLH 3.3e-12 No_clan