Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1431 ATGAAGATAACCGTAGGCCATTTTGAAGCATCTTTTCTGGAAAAAGACACAGATTTTGTGGGGACGTTTGTCAATATATTGTATCGATGTTCTCAAAGCCCTGAGGAGTGGAGAAAATACTTTGAGAGTGGAAACTGTAGCATCTACCAGATCATCTCCAATGCAATAAGAGTGGCTGCTTTGGATGATCCTGAACAGTTCAAACTTCGCAGAAGCAAGATTGTTGAGAGACTCTACTCTTGCAAATTCACTGGGTCTTGCTTCGGTGTTGATCAGACGGAGCAAGATGTTCATCGGTCCATTGCACAAGTTTTCCAGGACTGCAAAAACGCATGCGCTCATAATTACACTAAGGTCGATGATTCAGCAGTCGGAGGAGGAAGAGGGACAGATCAGCAGGCTAATGAACTGGGAAAAAACATTGAAGATGATAGCGAAAATATTCGCCGTGTTTTGCAGATTAAGAATGCACTCGAGAACAACGTATTGACGGATACTGAAATCCACGAGTCACTAAGGAAGCTGAAATTGACGGTTCGATCTGTTGGAGTTATGAAGGCTACAAAAATAGGGAGCACTATAAGTAATCTCAAGCGCCACAAATCAAAGGAGATCAGTCTTTTAGCAACAGCTATGGCTGACCAATGGAAGTCATTGATTGTGGAGTTTGTGGATAAAGCGACAGAAGCTGCAGCAACATCTAAAAACCCTGTGCCTAGCGTTGTTCTTGAAGAGTGGCGAGAATTTCCTTCTGTTGAATTTGTTCCTCAGCCTCCAGTGGAGTTTTCAGAGGACAATAATGAGAAAGGGACTGAGGACAGGCAAAAGAATGCTGCGAAAGAAAAGGAGAGTGAAGTGAAGCTGCAAGAAGAATCAATGAAGCGAGGGAAAAGAAAGAAAGAAACGGTTGAGAAATTCATAGATCGCATCAGTTCCAATGGAGCATCCAACAAGAGCAACGTCAAAGTTGAAAAGACTGAGAAGAAGAAGAACCTTTCAATGGGAAACAACAAAAGAAAACTGGAGGAGCAACTAATCGAGGACACAGAGTTCATCACACCCATCAGGCGCCCGAAAGCAGTACCACCGAAGCAAGAATCATCCATTCGTCAGAAACCATGCAGGTCAGCACCAAACCCTAATCTCCCACAGACAGAAAATCCCTCAGACAGAGATCAGAAGCCGCCAAGAGTGAAGAAAGAGGTTCAAAATAACTATTCTGAGCCTCGTAACAGGTACAGGGCCCTTCTTATCAATGCAGAACCCAGAGATGCTAGTCCCCGTGGGAGAGAGTCACGTAGGTCATCGGATGATAATACTGCAATGGAAGAAAGACTTGAGACCTCGAAGAAGAAACTTCGAGCGGGCTACCAAGATCATGAGAGAGCTAAAAGGAACATCCAGTTAATTCCACCAGAAGGTGATCTTAACAAGAAAGCATCGGCTAGCCGCTCCAAGAACCAAGCTCGAAAGTGA 1476 0.4417 MKITVGHFEASFLEKDTDFVGTFVNILYRCSQSPEEWRKYFESGNCSIYQIISNAIRVAALDDPEQFKLRRSKIVERLYSCKFTGSCFGVDQTEQDVHRSIAQVFQDCKNACAHNYTKVDDSAVGGGRGTDQQANELGKNIEDDSENIRRVLQIKNALENNVLTDTEIHESLRKLKLTVRSVGVMKATKIGSTISNLKRHKSKEISLLATAMADQWKSLIVEFVDKATEAAATSKNPVPSVVLEEWREFPSVEFVPQPPVEFSEDNNEKGTEDRQKNAAKEKESEVKLQEESMKRGKRKKETVEKFIDRISSNGASNKSNVKVEKTEKKKNLSMGNNKRKLEEQLIEDTEFITPIRRPKAVPPKQESSIRQKPCRSAPNPNLPQTENPSDRDQKPPRVKKEVQNNYSEPRNRYRALLINAEPRDASPRGRESRRSSDDNTAMEERLETSKKKLRAGYQDHERAKRNIQLIPPEGDLNKKASASRSKNQARK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1431 491 Pfam TFIIS helical bundle-like domain 172 220 IPR017923 -
Lele13g1431 491 MobiDBLite consensus disorder prediction 321 354 - -
Lele13g1431 491 SMART TFS2_5 148 222 IPR003617 GO:0005634
Lele13g1431 491 Coils Coil 279 299 - -
Lele13g1431 491 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 149 233 IPR035441 -
Lele13g1431 491 MobiDBLite consensus disorder prediction 369 389 - -
Lele13g1431 491 MobiDBLite consensus disorder prediction 424 468 - -
Lele13g1431 491 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 34 484 IPR044805 -
Lele13g1431 491 MobiDBLite consensus disorder prediction 257 491 - -
Lele13g1431 491 MobiDBLite consensus disorder prediction 265 307 - -
Lele13g1431 491 Coils Coil 141 161 - -
Lele13g1431 491 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 147 220 IPR035441 -
Lele13g1431 491 MobiDBLite consensus disorder prediction 390 407 - -
Lele13g1431 491 ProSiteProfiles TFIIS N-terminal domain profile. 146 223 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1431 Lele-ChrLele13 23885088 23889141 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele13g1431 Med26 0.00014 No_clan