Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1426 ATGGCCACAAGAACCGTTGTTCCACAAGAAGCAGTCAGAGGGGAGGCAGGGGTTGGAGGAGTAAAGCAGCAGAAGAAGAATGGAGCGGTGGAGGGAAGAAATCGCAGAGCCCTCGGCGACATAGGAAATAATCATCAGGTTCCTGCTAGAGGCATAGAAGTCGTCAAGCCCAACCGTCCCGTCACCAGGAGCTTCCGTGCCCAACTGCTTGCTAATGCCCAAGCTGCTGCTGAAAACAACAAGAAACAGGCTTGTGCAAATGTTGGTGGACCTCCTCCTCCTATTCTCGATGTGATTGATAATAGAGCCGCGCCTAAGCCTGCTCAGAAAGCAGTCTTTGTTAAACCCAGGAATGAACATGTTGCTGAAATAAAATCGGAAGAAGAAGTTAGAAAGGAGAAGATTGTGAGCAAGAAGAAAGGAGATGAAAAACCAAAGAAGAAACCCCACACTCTCACTTCAGTACTCACAGCTCGAAGCAAGTTAGCATGTGGTGTGACCAACAAACCAAAGGAGCAGATTGTCGATATTGATGCTGCTGACACAGAGAATGAACTTGCAGCTGTGGAGTATCTTGAAGACATTTACAAGTTCTATAAGCTAGTTGAGAATGAGAACCGTCCTCACGACTACATTGACTCACAGCTTGAGATTAATGAAAAGATGAGAGCAATATTGGTTGATTGGCTCATAGATGTGCACTCCAAGTTTGATCTTTCGCCTGAAACTCTTTATCTAACTGTCAATATAATAGATCGATTCCTTTCAAGCAAGATCTTGCCAAGAAGGGAGCTTCAACTGGTTGGCATCAGCGCCATGCTCATGGCTTCCAAGTATGAAGAAATCTGGCCACCTCAGGTCAACGACTTTGTTTTCCTGTCGGATAGAGCTTATACTCATGAACAGATACTTGCAATGGAGAAAACCATTCTGGGAAAGCTGGAATGGACTTTGACCGTACCTACGCACTATGTGTTCCTGGTTCGTTTCATCAAGGCATCGGTCCCAGATGAGGAGTTGGAAAACACGGTGCATTTTCTTGCTGAGTTAGGACTGATGAATTACGAGAGCATGATAAAGCATAGCCCATCGAAGGTGGCGGCGTCAGCAGTGTATGCGGCTCGTTGCACTCTGAATAAGAGCCCCTACTGGAACGAGACGCTCAGTCTTCATACGGGTTACTCAGAAGAACAACTCATGGATTGTGCGAGAGAATTGGTGAGGTGCCACTCCATGGTTGGGAGTGGGAAGCTGCGGGCAGTGTACAGAAAGTACTCAGATGTAAAGAGAGGGACGGTGGCGCTGCTTTCGCCGGCTAAGAATCTCTTACAGTTAGGGGAAGCTGAAGGAGGAAGATGA 1359 0.4702 MATRTVVPQEAVRGEAGVGGVKQQKKNGAVEGRNRRALGDIGNNHQVPARGIEVVKPNRPVTRSFRAQLLANAQAAAENNKKQACANVGGPPPPILDVIDNRAAPKPAQKAVFVKPRNEHVAEIKSEEEVRKEKIVSKKKGDEKPKKKPHTLTSVLTARSKLACGVTNKPKEQIVDIDAADTENELAAVEYLEDIYKFYKLVENENRPHDYIDSQLEINEKMRAILVDWLIDVHSKFDLSPETLYLTVNIIDRFLSSKILPRRELQLVGISAMLMASKYEEIWPPQVNDFVFLSDRAYTHEQILAMEKTILGKLEWTLTVPTHYVFLVRFIKASVPDEELENTVHFLAELGLMNYESMIKHSPSKVAASAVYAARCTLNKSPYWNETLSLHTGYSEEQLMDCARELVRCHSMVGSGKLRAVYRKYSDVKRGTVALLSPAKNLLQLGEAEGGR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1426 452 PIRSF Cyclin_A_B_D_E 1 449 IPR039361 -
Lele13g1426 452 Pfam Cyclin, C-terminal domain 321 438 IPR004367 -
Lele13g1426 452 SMART cyclin_7 325 408 IPR013763 -
Lele13g1426 452 SMART cyclin_7 228 312 IPR013763 -
Lele13g1426 452 PANTHER CYCLINS 144 427 IPR039361 -
Lele13g1426 452 SUPERFAMILY Cyclin-like 183 318 IPR036915 -
Lele13g1426 452 Gene3D - 194 434 - -
Lele13g1426 452 Gene3D - 208 319 - -
Lele13g1426 452 SMART Cyclin_C_2 321 439 IPR004367 -
Lele13g1426 452 MobiDBLite consensus disorder prediction 1 44 - -
Lele13g1426 452 ProSitePatterns Cyclins signature. 223 254 IPR006671 -
Lele13g1426 452 FunFam G2/mitotic-specific cyclin-1 309 434 - -
Lele13g1426 452 CDD CYCLIN 319 407 IPR013763 -
Lele13g1426 452 CDD CYCLIN 222 311 IPR013763 -
Lele13g1426 452 SUPERFAMILY Cyclin-like 320 440 IPR036915 -
Lele13g1426 452 Pfam Cyclin, N-terminal domain 194 318 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1426 Lele-ChrLele13 23845675 23847940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1426 1 448 Core Cell Cycle Gene Families AT4G37490 53.407 2.02e-144 417