Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1420 ATGAAGAAAATAATGGAAGGGAATGGATGTTGTTGTGGGAGCTTGGTGGAGAGGTGTAAGCCGTACATAGCCATGATTTCTCTTCAATTCGGCTATGCTGGCATGAACATCATCACCAAGGTTTCCCTCAACCGAGATCATACTCATATTCCTCCTATTCTTCGATTCTCGTTTCTTAACTCTCTGCTCTCTCTCAGGAAAGTCAGGCCCAAGATCACATTCCTCAGTTTCATGCAAATTTTCGTTCTTGGACTTCTTGGGTTCGTATTTCATTTCGTACTCCTTCCACTTCACCTCCCAGATATTCTGCAGGTTCTTATTATGCTCTGCTTTTACAGGCCTGTGATTGATCAAAATCTGTACTACGCCGGCTTGAAGCTCACTACCCCTACTTACTCATGTGCTATAAGCAACATGCTCCCCGCAATGACACTTCTCATGGCCGTTATATTAAGGATGGAGAAGGTAGACATCAGAAAGTTAAGATGTCAAGCGAAGGTGATTGGGACGATAGTCACAGTTACTGGGGCGATGTTAATGACACTGTACAAGGGCCAAGTCATCAACTTTTTCTGGTCTTATTACATGCGTCACCCTAGAGACTATACTCCTACAACGGCCGCTGATTCTGGGGAAAACGATTGGTTTAAGGGTTCTATTCTGCTCATAATTGCGACCCTTGCCTGGGCTTCTTTCTTCATCCTTCAGGCGCTCACGTTAAGGACTTACTCGGCTCAGCTCTCGCTCATATCACTGGTCTGTTTCATGGGCACACTTCAATCAATTGCGGTCACGCTTGTGATGGAACACAGACCCTCTGTTTGGTGCATTGGGTGGGACATGAATCTGCTAGCCGCAGCCTACGCTGGGATAGTATCGTCAGGCATTGCATATTACGTTCAAGGGGTTGTGATGCAGAAAAGAGGTCCTGTTTTTGTGACTGCTTTCAGCCCTTTGATGATGATCATTGTAGCCATCATGGGTTCTTTCTTACTGGCAGAAAACATCTACCTTGGAGGAGTGGTAGGGGCTGTGCTGATCGTAGTGGGTCTGTACTCTATTCTATGGGGAAAATGCGAGGAGAACAGGGAGAAAGAAGAAGCAGAGGCAATCTCAGAGGCAATAAGAGGGTGTTCAGATATTGAAGCGAACTCCATTGAGATGCAAAAGGTTGAAGGTGAAGTTATCAGAGGTTGGGATGAAGGAGTTGCCACCATGAAAAAGGGAGAGAGAGCAGTTTTAAAAATACCGCCAAACTTGGCGTATGGGGAGAAAGGTTCTCCACCATTGGTTCCTCCTAATGTGACTCTCGTCTTTGAGATTGAGATGCTGTCTTGGATTACCATCAGGGACTTGACCGGCGACGGAGGAATCCTGAAGAAGATAATAAGGGAGGGAGAGGGATGGGAGACTCCAAGAGAAGCCGACCAGGTCTTAGTGAAATATGAAGCAAAGCTGGAGAATGAAACGGTTGTTCATGAGTCTAATGGAGGTGTAGAGTTTAATATAAGTGATGGCTATCTTTGTCCTGCCATGAGTATAGCGTTGAAAACAATGAGAAAGGGGGAGGAAGCAGAGCTCAGTTTAAGATTCTTTTATGGCGCCATACAAAATTCAAGTAGAACCAGTGAAACGAATGTCAGTGACCAACCAGATTCTAATTTAACGAGTCTCAGAATAGAGCTGGTATCATGGAAAACTGTAATCGATGTCACAGGAGACAAAAAGATACTTAAGAAGATTGAGAAAGCTGGAGAGGGATTCGAGCGTCCTAATGAAGGATCACAAGTGAAAGTAATATATACGAGTAAACTAGAAGATGGAACAATTATTGAGAGGAAAGGAACAGAGAAAGAACCTTTTGAGTTCATAACTCAGGAAGAACAAGCACCTGAGGGGCTAGAAAAAGCAATCATGACAATGAGAAAAGGAGAGCAAGCCACAGTGGTTGTCACCGCAGAATATTTGTCTGATAAAAATAATTTTCCCACCACCCCAGCTAATAAAGTCCTTTGTTATGAGATTGAATTGGTTGATTTGATCAAGGAGAAGCCATTTTGGAAAATGGACACTCAGCAGAAAATAGAAGCTGTAAAATGCCTTGAGTTTGATCACTCATTCAGCGATGATGAGAAACGTGAAGCCAATCCCTTGAGGATATCTTGTTATTTGAACAATGCTGCCTGTAAACTTAAACTTGGAGAGTACACTGAAGCCTCAAAACTCTGTACTAAGGTTCTGGAACAAGATCCGTTAAATGTGAAGGCACTGTATAGAAGAAGCCAGGCATACCTGAAAACATCAGACTTAGAGAAAGCTGAGGCTGACATTAAAACAGCCCTCACTATTGATCCAAACAACAGAGACATGAGAGTTGAGTACAGGGAGCTGAAGCTTAAGCAAAGGGAATACAGTAGATATGAAGCTGACATCTTCAGCACAATGCTTTCGAAGATGGGCTAG 2463 0.4365 MKKIMEGNGCCCGSLVERCKPYIAMISLQFGYAGMNIITKVSLNRDHTHIPPILRFSFLNSLLSLRKVRPKITFLSFMQIFVLGLLGFVFHFVLLPLHLPDILQVLIMLCFYRPVIDQNLYYAGLKLTTPTYSCAISNMLPAMTLLMAVILRMEKVDIRKLRCQAKVIGTIVTVTGAMLMTLYKGQVINFFWSYYMRHPRDYTPTTAADSGENDWFKGSILLIIATLAWASFFILQALTLRTYSAQLSLISLVCFMGTLQSIAVTLVMEHRPSVWCIGWDMNLLAAAYAGIVSSGIAYYVQGVVMQKRGPVFVTAFSPLMMIIVAIMGSFLLAENIYLGGVVGAVLIVVGLYSILWGKCEENREKEEAEAISEAIRGCSDIEANSIEMQKVEGEVIRGWDEGVATMKKGERAVLKIPPNLAYGEKGSPPLVPPNVTLVFEIEMLSWITIRDLTGDGGILKKIIREGEGWETPREADQVLVKYEAKLENETVVHESNGGVEFNISDGYLCPAMSIALKTMRKGEEAELSLRFFYGAIQNSSRTSETNVSDQPDSNLTSLRIELVSWKTVIDVTGDKKILKKIEKAGEGFERPNEGSQVKVIYTSKLEDGTIIERKGTEKEPFEFITQEEQAPEGLEKAIMTMRKGEQATVVVTAEYLSDKNNFPTTPANKVLCYEIELVDLIKEKPFWKMDTQQKIEAVKCLEFDHSFSDDEKREANPLRISCYLNNAACKLKLGEYTEASKLCTKVLEQDPLNVKALYRRSQAYLKTSDLEKAEADIKTALTIDPNNRDMRVEYRELKLKQREYSRYEADIFSTMLSKMG 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1420 820 SUPERFAMILY FKBP-like 571 697 - -
Lele13g1420 820 SMART tpr_5 754 787 IPR019734 GO:0005515
Lele13g1420 820 SMART tpr_5 720 753 IPR019734 GO:0005515
Lele13g1420 820 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 594 681 IPR001179 GO:0003755
Lele13g1420 820 Pfam Tetratricopeptide repeat 731 788 - -
Lele13g1420 820 Gene3D - 567 682 IPR046357 GO:0003755
Lele13g1420 820 Gene3D - 449 566 IPR046357 GO:0003755
Lele13g1420 820 SUPERFAMILY TPR-like 697 816 IPR011990 GO:0005515
Lele13g1420 820 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 392 447 IPR001179 GO:0003755
Lele13g1420 820 PANTHER WAT1-RELATED PROTEIN 20 366 IPR030184 GO:0016020|GO:0022857
Lele13g1420 820 Pfam EamA-like transporter family 217 355 IPR000620 GO:0016020
Lele13g1420 820 Gene3D - 381 448 IPR046357 GO:0003755
Lele13g1420 820 SUPERFAMILY FKBP-like 452 532 - -
Lele13g1420 820 ProSiteProfiles TPR repeat profile. 754 787 IPR019734 GO:0005515
Lele13g1420 820 SUPERFAMILY FKBP-like 392 448 - -
Lele13g1420 820 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 590 678 IPR001179 GO:0003755
Lele13g1420 820 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 470 537 IPR001179 GO:0003755
Lele13g1420 820 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 384 444 IPR001179 GO:0003755
Lele13g1420 820 Gene3D Tetratricopeptide repeat domain 683 814 IPR011990 GO:0005515
Lele13g1420 820 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 475 566 IPR001179 GO:0003755
Lele13g1420 820 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1420 Lele-ChrLele13 23801080 23806825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1420 392 819 Calmodulin-binding Proteins AT5G48570 48.701 4.11e-146 440