Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1402 ATGTATCACGCAAAGAAGTTTCCCTCGGGAACTGTCGTGCCAAATAAAGCTCAAGGTGGTGTTGAGCAGCTTGCAAGCATACCGGATTTGAGTGGATCTGCGGTGAAAAATGCCACACCTGTGGGAGGAAGTGGGAAACAACGATTACGGTGGACGTCAGATCTTCATGACCGTTTTGTGGATGCCATTACGCATCTCGGTGGACCAGATAGGGCAACTCCAAAAGGCGTTCTTCGGGTTATGGGAGTACCTGGACTCACAATTTATCATGTTAAAAGCCATTTACAGAAATACCGCCTTGCAAAGTACTTGCCAGAGTCTTCAGCTGATGAGTCGAAGGATGAGAAAAGGAATTCTGGGGACACCATATCTGGCACAGATTCTTCCCCGGGATTGCAAATCAGTGATGCTCTGAGGATGCAGATGGAGGTTCAGAAACGTCTCCATGAACAGCTAGAGGTTCAAAAGCAGTTACAAATGAGAATTGAAGCACAGGGTAAATACTTGCAGAAGATCATAGAGGAGCAGCAGAAACTAGGTAATACCTTGAGAGATTCGGAAACACTACTATCATCAAAAGATGAGCAAGATCCTCTGCACTCAGAACCTTCGGGTGATGTCTCTGCAGAGACACAGCCTCCTTTGAAGAAACAGAGAGTTGATGATGACTCCAAGAATGGCATCACGACCCTCCCAGCTACCAATAAGGATTGCACAGAAGATTGA 726 0.4628 MYHAKKFPSGTVVPNKAQGGVEQLASIPDLSGSAVKNATPVGGSGKQRLRWTSDLHDRFVDAITHLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADESKDEKRNSGDTISGTDSSPGLQISDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLRDSETLLSSKDEQDPLHSEPSGDVSAETQPPLKKQRVDDDSKNGITTLPATNKDCTED 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1402 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 207 IPR044848 GO:0003700
Lele13g1402 241 MobiDBLite consensus disorder prediction 106 133 - -
Lele13g1402 241 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Lele13g1402 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Lele13g1402 241 FunFam Myb family transcription factor 45 103 - -
Lele13g1402 241 Pfam MYB-CC type transfactor, LHEQLE motif 132 178 IPR025756 -
Lele13g1402 241 Gene3D - 45 104 - -
Lele13g1402 241 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Lele13g1402 241 MobiDBLite consensus disorder prediction 106 121 - -
Lele13g1402 241 MobiDBLite consensus disorder prediction 225 241 - -
Lele13g1402 241 MobiDBLite consensus disorder prediction 184 241 - -
Lele13g1402 241 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1402 Lele-ChrLele13 23688799 23692106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1402 44 231 G2-like Transcription Factor Family AT3G04450 49.231 3.50e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele13g1402 Myb_DNA-binding 5e-06 CL0123