Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1392 ATGGGGAGCAAAGCAGGTCGCCGGAGCCGACGCAAAACCAATCAAATGCCAACCCCGACCAACTTAAAGGAAGATGAGAGAAACGAGAAGATTATCAGAGGTCTTATGAAACTTCCGCCCAATCGGAGATGTATCAGCTGCAATAGTCTGGGTCCGCAATATGTATGTACGACTTTTTGGACCTTCGTTTGCATGACATGCAGTGGGATACATCGTGAATTTACTCATCGAGTTAAGTCTGTATCAATGGCAAAGTTCACTTCTCAAGAAGTAGAAGCTCTTCAAAATGGTGGCAACCAGCGTGCAAGGGACATATATTTGAAAGATTGGGATTTCCAAAGGCAGCGTATGCCAGATAGCAGCAATGTTGACAAAATAAGGGAGTTTATAAGGAATAGCCCTAAAATCCAAGGAGATGACACAAGGCGGGCTAGCTCTTATCATTCTTATTCTCAAAGTCCTCCATATGATTATCAATATGAAGATCGACGGTATGGAAGACAAGCAGCTGCATTGACCAGGAAGCCTGGTTCAGATAAAGGAGGTCGTTATGAAGGGAAGATGTCTAGTATTATTTATAGTCCTGGGCGCTTCAGTGACCATGCATCTGAGGATGGCTTTGCTAATGAGGGATCTGGTCCAAGAATTTTGGACTATTCTGTGTCTAGTGCTGGTGCTGTGCAGTCTCCTAAGTTTCATAGGGACATGCGAAGAAGTCCATTCCATCAGCATTCTAGTGCGGGGTCAAGTGAAGATGTATGGTCTCCATCACGGTATACATCTCTGGAAACAATTGTCAAGGGTGATTCAGATGGACATCATCCACAGAGAACCACACCACGGGGATCAACTGACTGCAATCCATCATCCAGTAGATCTTTCAGTTCTGGTGGTTTAGATTTTTTTTCAGAGCCTGTCCAAGCTTCTGGATCTAATCAAGATAAGGTGTCTGCCATACCAGCATCACAACAATCACGTCCAGCAAGATCAGTTAGCTTGGATCTTTCAAATGCAGCTGTGGCATCTCAGCCATCGTATTCGCCACCTATTGATCTTTTTGAGTTTCCAGCATCATCTCAGGCTCCATCAGTGGATTTGTTTCAACCATCTATTTTGTCTTCAGCTCCATCTTCGAATGAAAATCAACCGTCACAAACATCTCAGTCCTCATCTATTGAGTTCTTTGCGGATGTTTCTAAGCAGCAACCTGCTGCTCCATCAGATAACAAGTCACCAGAGTTCTTTGTTCCTAAAAATGAAGGATGGGCAACATTTGATATCCCTCAGCACACAGCATCTCCTGCACAAGTTGAAATTCCAACAGTAGTTCCTTCAACTGACAAGTCTTTGCTGGAGTTATTTGATCCATTTTCAACTGCAAATGCCAACAAGCAGTGGCCATCTTTTGACACTTCTGGTGTTCATGAACCTTCAACCACCTCTAATGCATGGCATGGTGGTGTGCAGAATGGAGAACAAGCTTCCATATCCGCAGCAAATGCTCAACCATGGAATGCATTCGAAGATTCTGGTTCCCACCTTCCTGTACATGCTGTTAATCAAGGGTTGCAACTGCATAACCTTCCATCAAGTGATGATCAATTTTTAAGCTCAAAAGTTTCTGAGGGTTCCAAAGGTGGGGTGCAAGACTTTGCCCCTATTGGTGCATTCGATGATAATATTCAATCAGATGTTAGTGGTTTACCATATTCTCCAACTGTGCTTCCTCTGATGGAAGAAACTCAACTCAGTGCAACCCACCAGAAATCAACTAATCCATTTGATCTTCCCTTTGAATCTGATGTAGAGCACAACAATATGTTCCTTGATCTGAGCTCATTGCAAGCTGCGCTGCCTGATTCCCAGTTGGCTCCCGCATACCGTGGAGATAATGGTATAGCTGAACCATGGCTCCCGCAAAGTGTGACCCCATATATTTCTTCTGCTGGACAAGGTGGTCTATCCTTCATGGCTGCGCAGCCACCAAGCCCTCAAATATCGAACATCCAGACGCAAGGGCCCGTTGCATCCTTTGGGGGCAATCCTTTTGCATAG 2055 0.4457 MGSKAGRRSRRKTNQMPTPTNLKEDERNEKIIRGLMKLPPNRRCISCNSLGPQYVCTTFWTFVCMTCSGIHREFTHRVKSVSMAKFTSQEVEALQNGGNQRARDIYLKDWDFQRQRMPDSSNVDKIREFIRNSPKIQGDDTRRASSYHSYSQSPPYDYQYEDRRYGRQAAALTRKPGSDKGGRYEGKMSSIIYSPGRFSDHASEDGFANEGSGPRILDYSVSSAGAVQSPKFHRDMRRSPFHQHSSAGSSEDVWSPSRYTSLETIVKGDSDGHHPQRTTPRGSTDCNPSSSRSFSSGGLDFFSEPVQASGSNQDKVSAIPASQQSRPARSVSLDLSNAAVASQPSYSPPIDLFEFPASSQAPSVDLFQPSILSSAPSSNENQPSQTSQSSSIEFFADVSKQQPAAPSDNKSPEFFVPKNEGWATFDIPQHTASPAQVEIPTVVPSTDKSLLELFDPFSTANANKQWPSFDTSGVHEPSTTSNAWHGGVQNGEQASISAANAQPWNAFEDSGSHLPVHAVNQGLQLHNLPSSDDQFLSSKVSEGSKGGVQDFAPIGAFDDNIQSDVSGLPYSPTVLPLMEETQLSATHQKSTNPFDLPFESDVEHNNMFLDLSSLQAALPDSQLAPAYRGDNGIAEPWLPQSVTPYISSAGQGGLSFMAAQPPSPQISNIQTQGPVASFGGNPFA 684
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1392 684 MobiDBLite consensus disorder prediction 370 391 - -
Lele13g1392 684 SUPERFAMILY ArfGap/RecO-like zinc finger 27 131 IPR037278 -
Lele13g1392 684 PRINTS HIV Rev interacting protein signature 41 60 IPR001164 GO:0005096
Lele13g1392 684 PRINTS HIV Rev interacting protein signature 60 77 IPR001164 GO:0005096
Lele13g1392 684 PRINTS HIV Rev interacting protein signature 78 99 IPR001164 GO:0005096
Lele13g1392 684 MobiDBLite consensus disorder prediction 279 330 - -
Lele13g1392 684 MobiDBLite consensus disorder prediction 1 27 - -
Lele13g1392 684 SMART arf_gap_3 29 147 IPR001164 GO:0005096
Lele13g1392 684 Pfam Putative GTPase activating protein for Arf 30 132 IPR001164 GO:0005096
Lele13g1392 684 Gene3D Arf GTPase activating protein 19 137 IPR038508 -
Lele13g1392 684 MobiDBLite consensus disorder prediction 129 158 - -
Lele13g1392 684 PANTHER ARFGAP/RECO-RELATED 21 684 IPR044820 GO:0005096
Lele13g1392 684 FunFam Arf-GAP domain and FG repeat-containing protein 1 19 137 - -
Lele13g1392 684 CDD ArfGap_AGFG 29 131 - -
Lele13g1392 684 ProSiteProfiles ARF GTPase-activating proteins domain profile. 29 132 IPR001164 GO:0005096
Lele13g1392 684 MobiDBLite consensus disorder prediction 265 330 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele13g1392 Lele-ChrLele13 23639433 23645210 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1392 32 137 C2H2 Transcription Factor Family AT4G05330 30.769 2.75e-10 60.5