Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1391 ATGGGAAGACCTACTTGCCGTGACAAAGTTGGGATGAAGAAGGGACCATGGACTCCTGAGGAGGATATCATCCTTGTTTCTTACACCCAAGAACATGGCCCTGGAAATTGGAGATCAGTCCCTACTAATGCCGGAAATTACACTTCATCATCTCTTAGGCTTAGTCATCAGTCTCAGTCCTGCTCCTCCACCTATGCCTCAAGCACTGAGAACATCTCACGCCTCTTACAAGGTTGGATGAGATCATCACCAAAAGCAGACACTAGTCTTCTCCAAGTTCATCATGATAAGCAGAGATCAGATAGCAATAACAATGCTCCTCCAATATCGTTTCTTGAGAAGTGGCTGTTTGAGGAAAATGGGGGCCATGAGGAGATGATGGTCCAATATCGTTTCTTGAGAAGTGGCTGTTTGAGGAATATAGGGGCCATGAGGAGATGA 441 0.458 MGRPTCRDKVGMKKGPWTPEEDIILVSYTQEHGPGNWRSVPTNAGNYTSSSLRLSHQSQSCSSTYASSTENISRLLQGWMRSSPKADTSLLQVHHDKQRSDSNNNAPPISFLEKWLFEENGGHEEMMVQYRFLRSGCLRNIGAMRR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1391 146 CDD SANT 16 54 IPR001005 -
Lele13g1391 146 Pfam Myb-like DNA-binding domain 14 53 IPR001005 -
Lele13g1391 146 SUPERFAMILY Homeodomain-like 9 54 IPR009057 -
Lele13g1391 146 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 53 IPR017930 -
Lele13g1391 146 MobiDBLite consensus disorder prediction 86 105 - -
Lele13g1391 146 ProSiteProfiles Myb-like domain profile. 9 53 IPR001005 -
Lele13g1391 146 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 61 - -
Lele13g1391 146 Gene3D - 13 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1391 Lele-ChrLele13 23637154 23638313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1391 1 45 MYB Transcription Factor Family AT5G62470 82.222 1.46e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele13g1391 Myb_DNA-binding 4.1e-08 CL0123