Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1367 ATGGCTGACCCTCGGCGTCATCCCTCTTCCGCCGCTCGCTACCTTAAACCCTCATCCCCAGCTGCCGCCTCCACCCCTCCCTGTGGCGCCTGCAAGTTCCTCCGCAGGAAGTGCGTTGCTGGCTGCATCTTCGCTCCCCACTTTAGCTCCGACCAGGGCTCTGCCCGCTTCGCCGCCGTCCACAAGGTCTTCGGCGCTAGCAATGTCTCTAAGCTCTTGCTTCATATTCCCGTCAACCGCCGCCACGAAGCCGTGGTTACCATTTCCTACGAGGCTCAAGCTCGCTTGTCCGATCCTGTTTATGGCTGTGTCGCCACTGTTATTTCTTTACAACAACAGGTTCTTATAATTCCAAAAAATATGCGTGGCATCTCTGCAAGCAGAGCTAGGGATGGTTCAAAGTCAGCTGATGAACAGCAGCACCGCTTTACGCTGTCTTCATACCTCCAATAG 453 0.5541 MADPRRHPSSAARYLKPSSPAAASTPPCGACKFLRRKCVAGCIFAPHFSSDQGSARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVATVISLQQQVLIIPKNMRGISASRARDGSKSADEQQHRFTLSSYLQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1367 150 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Lele13g1367 150 MobiDBLite consensus disorder prediction 127 150 - -
Lele13g1367 150 MobiDBLite consensus disorder prediction 1 25 - -
Lele13g1367 150 PANTHER LOB DOMAIN CONTAINING PROTEIN 24 140 - -
Lele13g1367 150 Pfam Lateral organ boundaries (LOB) domain 27 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1367 Lele-ChrLele13 23500929 23503248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1367 27 114 AS2 family AT3G03760 89.773 9.40e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele13g1367 LOB 1.2e-34 No_clan