Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1366 ATGTGCTATGAAGACACCATAACTCAGCTTCATATAATAGGTGAAACAAAGAGAACTTCCCTTCTTCCTCGAAATTTCTCAATAGATTCCTTTTTCAAAACACTGGCAAAACTTCCCAATTTGAAAGTCCTCACTCTGGTTTCTCTTGGTATATGGGGTCCATTTCCGGCTAAAATGTCTATCTTGGCATCACTGGAAATAGTTAACATGAGCTCTAATTGCCTATATGGCGCCATACCACGAGAGCTTTCTTCACTTTCCAATCTTCACACTCTCATTCTTGATGAAAACATGTTGGCTGGTCAGATTCCTTATTGGATTTCAATGGATTCATTTCCAGCCTTAACTGTGTTGAGTTTGAAAAACAATAGGTTCAATGGATCTTTGCCTGATTCATTGGGTAGCTTAGAAAATCTCAGGGTTCTTTCACTTTCTCATAATCACTTTTATGGGACGGTACCTGATTTGAGCCGTTTGAAGAATCTTCAAGTTCTGGATTTGGATAGTAATGCTTTTGGGCCTCAGTTTCCTCAACTTGGTACAAAATTGGTCACTCTTATACTAAGGAACAATAGCTTCAGGTCTGGTATTCCTTCTGAAGTGACCTCTTATTACCAGCTTGAGCGATTGGATATATCATTAAACACATTTGTGGGGCCATTTCAGCCAGCCTTGTTGTCTCTTCCTTCAATCACTTACCTCAACATTTCTGGGAACAAATTAACTGGGATGGTTTTTGAGAACATGTCCTGCAATTCAGAACTTGAAGTTGTGGATTTGTCCTCAAATCTTTTGACAGGCAAATTGCCCAGATGTTTGTTAGTGTCAAATTCAAGTGATAGAATAGTGCAGTATGCTAGAAATTGTCTCGATGGCGCGGATCAGAATCAGAACCCACCACCATTTTGCCACACTGAGGCCTTAGCTGTGGGGATATTACCCGAGAGAAAGAAGCCCAAAGGATTGAACAAGCTGGTGCTTTCCATTGGAATTGCAGGTGGAGCTGTAGGAGTTGTTGTACTTGTTGGGCTTGCTCTCTTTCTTGTTAAAAGAGGAAATGACAAAAGTAAAAGTAAGAATCCTCCAGTAAGATTTATATCTGAAAATGCTGCTTCTGGATACACCTCCAAGTTGCTTTCTAATGCAAGGTATATATCCCAAACAATGAAGTTGGGAGCAGTTGGTTTGCCAACTTATCGAACTTTCTCACTGGAGGAGATTGAGACCGCTACAACCTACTTCAACACAGCTTCTTTCATGGGTGAAAGTTCTCATGGGCAGCTGTATAGAGGTCAGTTGAAGAATGGTTCAGTTGTGGCCATTAAATGTGTGAAAATGAGAAAAGGTTATAGCACACAAAGCTTTATGCAGCAAATAGAGCTGATATCAAAACTCAGGCATCGTCATTTAGTCAGTGCTCTTGGACACTGCTTTGAATGTCATTTAGATGATTCAAGTGTCAGCAGAATATTCCTTGTCTTTGAATACGTACCAAATGGCACGCTCAAGAGCTGGATCTCTGATGGGAATCCTTCAGAATCACTTAGTTGGACTCAACGCATAGCAGCTGCAATTGGAGTAGCAAAGGGAATCCAGTTTTTGCATACTGGGATTCTCCCTGGTGTGTATTCAAACAACCTCAGAATAACAGATGTTTTATTAGACCACAACCTCGTCGCAAAAATCTGCAGCTATAACCTGCCATTGTTATCAAACTTGGGAGAGGTTGGCAATGGAAATTCTTCCAGCAAATCCAAAAGTCCTAAAGTTAACAAAAGTAATAAACATGACGATAAGTCTGATATATACGACCTGGGAGTCATACTATTGGAACTCATCCTCGGTAGGACAACGAAGTCAAAGAATGACGTGGACACTTTAACTAATCTGTTGCAGGCAAGCATAATAGCTGATGATGATGCAAGGAGAAGCGTGGTGGATCCTGCGATTCGAAGGGGAAGCTTGGATCAATCATTGAAGACGATGATGGAGGTTTGCGTGAGGTGTGTGGCTAAAGAGGAAGAAGAAAGACCTTCAATTGAGGATGTGTTATGGAATCTACAATTTGCTGCTCAAGTTCAGGATTCATGGCGAGTGGATTCTCGAAGTAGTAGTGATTGGTCTCCTGGTTCTCCTTCAGACCCCGCGAGACTCGTCTTCCATTAG 2166 0.4132 MCYEDTITQLHIIGETKRTSLLPRNFSIDSFFKTLAKLPNLKVLTLVSLGIWGPFPAKMSILASLEIVNMSSNCLYGAIPRELSSLSNLHTLILDENMLAGQIPYWISMDSFPALTVLSLKNNRFNGSLPDSLGSLENLRVLSLSHNHFYGTVPDLSRLKNLQVLDLDSNAFGPQFPQLGTKLVTLILRNNSFRSGIPSEVTSYYQLERLDISLNTFVGPFQPALLSLPSITYLNISGNKLTGMVFENMSCNSELEVVDLSSNLLTGKLPRCLLVSNSSDRIVQYARNCLDGADQNQNPPPFCHTEALAVGILPERKKPKGLNKLVLSIGIAGGAVGVVVLVGLALFLVKRGNDKSKSKNPPVRFISENAASGYTSKLLSNARYISQTMKLGAVGLPTYRTFSLEEIETATTYFNTASFMGESSHGQLYRGQLKNGSVVAIKCVKMRKGYSTQSFMQQIELISKLRHRHLVSALGHCFECHLDDSSVSRIFLVFEYVPNGTLKSWISDGNPSESLSWTQRIAAAIGVAKGIQFLHTGILPGVYSNNLRITDVLLDHNLVAKICSYNLPLLSNLGEVGNGNSSSKSKSPKVNKSNKHDDKSDIYDLGVILLELILGRTTKSKNDVDTLTNLLQASIIADDDARRSVVDPAIRRGSLDQSLKTMMEVCVRCVAKEEEERPSIEDVLWNLQFAAQVQDSWRVDSRSSSDWSPGSPSDPARLVFH 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1366 721 SUPERFAMILY Protein kinase-like (PK-like) 396 689 IPR011009 -
Lele13g1366 721 ProSiteProfiles Leucine-rich repeat profile. 138 160 IPR001611 GO:0005515
Lele13g1366 721 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 387 496 - -
Lele13g1366 721 SUPERFAMILY L domain-like 23 290 - -
Lele13g1366 721 Pfam Protein tyrosine and serine/threonine kinase 419 684 IPR001245 GO:0004672|GO:0006468
Lele13g1366 721 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1366 721 Gene3D Transferase(Phosphotransferase) domain 1 497 705 - -
Lele13g1366 721 Gene3D Ribonuclease Inhibitor 5 109 IPR032675 -
Lele13g1366 721 Gene3D Ribonuclease Inhibitor 178 293 IPR032675 -
Lele13g1366 721 Gene3D Ribonuclease Inhibitor 110 177 IPR032675 -
Lele13g1366 721 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 37 687 - -
Lele13g1366 721 MobiDBLite consensus disorder prediction 577 596 - -
Lele13g1366 721 Gene3D Phosphorylase Kinase; domain 1 386 496 - -
Lele13g1366 721 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 497 703 - -
Lele13g1366 721 MobiDBLite consensus disorder prediction 701 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1366 Lele-ChrLele13 23492821 23495793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1366 1 716 Miscellaneous Gene Families AT3G03770 61.421 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele13g1366 PK_Tyr_Ser-Thr 5e-24 CL0016