Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1345 ATGGCAGCCGAGAAGAGAGAATTGGAGATCTCCAACAAGACTTCCAATGCTAACTCTAACAACACTAACCTCGTGCAAATCGTAGATTCTTCACCTCCTTTGGCTTCCGTTGGCAACGATACTTCTAATAAGGAGGCTGAAGAACGACAGGCTCGTGACCTCAAAGCTGGTCTTCATCCCCTAAAGCACAAATTTGTATTTTGGTACACCCGCCGTACACCTGGAGTTCGAAATCAGACATCATACGAAGACAACATAAAGAGAATTGCTGATTTCAGTACGGTTGAAGGTTTTTGGGTTTGCTATTGCCATCTAGTCCGCCCTTCCTCCTTGCCAGTTCCAACAGATTTGCATCTTTTTAAGGAAGGAATTCGTCCTTTATGGGAGGACCCAGCTAATTGTAATGGTGGTAAGTGGATCATACGATTCAAAAAGGTCGTTTCAGGTCGCTTTTGGGAGGACTTGGTTCTTGCCTTAGTAGGTGACCAGCTCGATTATGGGGATAACATATGTGGTGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCACTGCATCTGACCATCAGGCCGTGATGGCTCTTAGGGATTCAATTAAACGCCACTTAAAGCTTCCTCATAACTATGTCATGGAATACAAGCCCCATAATGCCTCTTTGCGAGACAATTCATCCTACAGAAACACCTGGTTGAGAGGGTAG 717 0.4463 MAAEKRELEISNKTSNANSNNTNLVQIVDSSPPLASVGNDTSNKEAEERQARDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKRIADFSTVEGFWVCYCHLVRPSSLPVPTDLHLFKEGIRPLWEDPANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRTASDHQAVMALRDSIKRHLKLPHNYVMEYKPHNASLRDNSSYRNTWLRG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1345 238 FunFam Eukaryotic translation initiation factor NCBP 32 231 - -
Lele13g1345 238 Gene3D RNA Cap, Translation Initiation Factor Eif4e 32 231 IPR023398 -
Lele13g1345 238 SUPERFAMILY eIF4e-like 47 234 IPR023398 -
Lele13g1345 238 MobiDBLite consensus disorder prediction 1 50 - -
Lele13g1345 238 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lele13g1345 238 MobiDBLite consensus disorder prediction 12 41 - -
Lele13g1345 238 Pfam Eukaryotic initiation factor 4E 60 218 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lele13g1345 238 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 41 226 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1345 Lele-ChrLele13 23383545 23386201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1345 41 238 Eukaryotic Initiation Factors Gene Family AT5G18110 80.303 8.44e-122 343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1345 13 23383545 23386201 Lele15g1100 15 6369726 6372372 hybridization
Lele13g1345 13 23383545 23386201 Lele16g1125 16 6336458 6339250 hybridization