Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1337 ATGCGAACGCTTCCACGAAGACAAAGCATCCAAAAGCTAATCCCATATCGCCACCTAAATAATATTTATTTCTTTATATGCAAAAAGATTGTTGAAATTTTCAGAGCGACTCTAGTGGGCTATGATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCTAGGAGATCAAAGCGGCTTGGTGATTTTCAGCCTGCCCCACAACCTATTGAAGAGAACTGCACACAAACTGCTCCAAACAAGACCAGAAGGAGAGTTGGTGGTGGAAGAGGAAGAGGTTGGAATGCCCCAGCTGTAGCGAAAGGAACTTCACCAGCAGTGCCTACAAGACGAACTGCAGCTGGTAGGGGCCGGGGAGGCAGATTGGTTGATATTGTTCCTGAACCTGTTGCACTTGGGGCCCCTGAACCTGTTCTTAATCGTGAAGAGGTAGCAGCCAATAACAATATATTGATGGCGGGTGGAAGTGCAGACAAGGTGGCAGGAGCTGAAGAGGAGGCATGCACAACCCCTGTTCCTGAAACGGTACAAGTCGGTAGTTCTCCTTTATATAAGATAGAAACGAAGTTGGGTAAGGGTGGTTTCGGTCAAGTGTATGTGGGCAGAAGGGTAAGTGGTGGCTCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCACTGAAGTTTGAACATAGAAATAGTAAAGGTTGCAATTATGGGCCTCCTTACGAGTGGCAAGTCTACAATACCCTGAGCGGTTGTTATGGCATTCCCGGGGTTCATTACAAGGGTCGCCAAGGAGATTTCTATATACTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGACGTATGGAATTCTCTTGGCCAGTCGATGTCACCAAATATGGTTGCGTGCATTGCAGTGGAGGCAATATCAATTCTTGAGAAGCTCCATATGAAAGGGTTTGTGCATGGAGACGTTAAACCAGAGAACTTTTTACTTGGTCGACCTGGAACAGCTGATGAGAAGAAGTTATATCTTATTGATCTTGGTTTGGCATCTAAATGGAAGGACACATCTGGTCAACATGTTGAATATGATCAGAGGCCTGACGTGTTTAGGGGAACCGTAAGATATGCCAGTGTACATGCACATTTAGGTAGGACTGGAAGTAGGAGGGACGATCTTGAGTCCCTGGCATATACATTAATATTTCTTATAAAAGGGAGGTTGCCTTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTGTCTAAGAAAAAGATGGGCACTTCTCCAGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTCAAGCAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCCAACTATTCCAAGCTTATATCATTATTTGATAGCTTGATTGAACCATCTTCTCAATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAGAGGGCTAGAATGCTTATAAATCTGGAAGATGATGAGCAGCCAAAGAAGAAAGTGCGATTGGGGAATCCTGCTACTCAGTGGATATCAGTGTATAATGCACGGCGTCCCATGAAACAGAGATATCACTATAATGTATCAGATGGTAGGCTTCGACAGCACGTAGACAAGGGTAATGAGGATGGATTATATATCAGCTGCGTGGCCTCCTCATCAAATCTTTGGGCCCTAACCATGGATGCAGGAACGGGTTTCTCCTCTCAGGTCTATGAGTTGTCACCGGTCTTCCTGCACAAGGATTGGATTATGGAACAATGGGAGAAAAATTACTATATTAGTTCTATAGCTGGTGCAACAAATGGGAGTTCCTTGGTTGTTATGTCCAAAGGAACTCCGTACACCCAGCAGTCCTACAAAGTAAGTGAATCATTCCCTTTCAAATGGATCAATAAGAAGTGGAAAGAAGGATTCCATGTTACTTCTATGACCACTGCTGGCAGTCGATGGGGCGTTGTTATGTCCAGGAATGCAGGGTATTCTGATCAGGTTGTGGAGCTGGACTTCTTATACCCAAGTGAAGGTATTCATCGGCGATGGGAGAGTGGTTACCGGATAACATCTATAGCTGCTACTGCTGATCAGGCAGCCTTCATTCTTAGCATCCCAAAACGCAAATTGCTCGATGAAACTCAAGAGACTCTACGTACCTCTGCCTTCCCTAGCACCCATGTGAAGGAAAAGTGGACCAAGAATCTTTATATAGCTTCAATATGTTATGGGAGGACTGTTTGTTAG 2238 0.4486 MRTLPRRQSIQKLIPYRHLNNIYFFICKKIVEIFRATLVGYDLNGERMPELRSGARRSKRLGDFQPAPQPIEENCTQTAPNKTRRRVGGGRGRGWNAPAVAKGTSPAVPTRRTAAGRGRGGRLVDIVPEPVALGAPEPVLNREEVAANNNILMAGGSADKVAGAEEEACTTPVPETVQVGSSPLYKIETKLGKGGFGQVYVGRRVSGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLSGCYGIPGVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGRPGTADEKKLYLIDLGLASKWKDTSGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVSKKKMGTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISLFDSLIEPSSQLRPIRIDGALKVGQKRARMLINLEDDEQPKKKVRLGNPATQWISVYNARRPMKQRYHYNVSDGRLRQHVDKGNEDGLYISCVASSSNLWALTMDAGTGFSSQVYELSPVFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSIAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWTKNLYIASICYGRTVC 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1337 745 ProSitePatterns Protein kinases ATP-binding region signature. 191 222 IPR017441 GO:0005524
Lele13g1337 745 SMART serkin_6 185 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1337 745 Gene3D Transferase(Phosphotransferase) domain 1 153 507 - -
Lele13g1337 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Lele13g1337 745 PANTHER CASEIN KINASE-RELATED 186 709 - -
Lele13g1337 745 FunFam Casein kinase 1-like protein 157 504 - -
Lele13g1337 745 Pfam Protein kinase domain 185 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1337 745 MobiDBLite consensus disorder prediction 81 119 - -
Lele13g1337 745 ProSiteProfiles Protein kinase domain profile. 185 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1337 745 CDD STKc_CK1 185 458 - -
Lele13g1337 745 SUPERFAMILY Protein kinase-like (PK-like) 185 471 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1337 Lele-ChrLele13 23345991 23351594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1337 302 458 MAP Kinase Kinase Kinase AT5G50180 26.061 2.82e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lele13g1337 Pkinase 1.6e-15 CL0016