Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1321 ATGGAAGAGCCGGTCGTGGTGAACAAAGGGGAAGATCAGCCTCTGGATTTGCCTCCGGGCTTCAGATTCCACCCCACCGATGAGGAGATCATTACTTATTATCTCACCGAGAAGGTCCTCAACTGCAGTTTCAGCGCAACTGCCATCGGAGAGGCCGATTTGAACAAGTGCGAGCCTTGGGACTTGCCCAGAAAATTCGCCATTTACAATCTCCCCAAAGCTGCCAAGGATGAATGGGTTGTAAGCAAGGTTTTCCACAAGAACTCTGATGTGAAAAAGAACCCAATTCAAGGCCTTTTGAGGATCAACTCTCTCGGTGATGATTTGCTCGACTGTTCATCGCTCCCACCTCTTATGGATCCTCCTATCAAACCTACCTACAGCGGCGGCGCCTTCAAGGGGAACATTAACCCATCCCCACCACCCATGCCATCATCTAAACCATCATCCGACGGCTATTACGTTCCCAACCTCTCCATCATCAACAATAATCAGCCGCAGCAGCTGATGATGAAGCCTCAAGGAGCCATGATGATGCCCAACAATAACAACATCAATTACACCACCTTCAATCAAGGCAATTCCAGTTTCATCAGTGACTCGCTTTCGCATCCTCAGGCTCACCAAATCCAGAATCCCAGCTTCTCGTTTCAGCAGAATATTGGTAATCCAGCTGGTTACGGGATGAGTAATGATCAGCAGCAGCAGCAGGCTTTTCTGAGATCATTTTCTGCGAATAACAACAACGACGTCGGCTTGTTTGGGTTGGAGAAATTCTGCAAGACGGAGCCGATGGTGTCGTCCGGCAATCAGTCTGTGGTGAGCGTGTCGCAGGATACAAGCCTCAGCAACGACAGAAACGCTGACACTTCCTCCGCTGTTTCCAAGCTCAACATGGGAATAAGGAACAAGGCATCGTACGAGGATCTTGAGGCGCCATCGGCTGGGCCCCTTTCTGAGTTGGAAGGCCTGTGGGACTACTGA 984 0.501 MEEPVVVNKGEDQPLDLPPGFRFHPTDEEIITYYLTEKVLNCSFSATAIGEADLNKCEPWDLPRKFAIYNLPKAAKDEWVVSKVFHKNSDVKKNPIQGLLRINSLGDDLLDCSSLPPLMDPPIKPTYSGGAFKGNINPSPPPMPSSKPSSDGYYVPNLSIINNNQPQQLMMKPQGAMMMPNNNNINYTTFNQGNSSFISDSLSHPQAHQIQNPSFSFQQNIGNPAGYGMSNDQQQQQAFLRSFSANNNNDVGLFGLEKFCKTEPMVSSGNQSVVSVSQDTSLSNDRNADTSSAVSKLNMGIRNKASYEDLEAPSAGPLSELEGLWDY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1321 327 Pfam No apical meristem (NAM) protein 18 66 IPR003441 GO:0003677|GO:0006355
Lele13g1321 327 Gene3D NAC domain 26 79 IPR036093 GO:0003677|GO:0006355
Lele13g1321 327 ProSiteProfiles NAC domain profile. 17 161 IPR003441 GO:0003677|GO:0006355
Lele13g1321 327 SUPERFAMILY NAC domain 15 66 IPR036093 GO:0003677|GO:0006355
Lele13g1321 327 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1321 Lele-ChrLele13 23260000 23261541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1321 1 65 NAC Transcription Factor Family AT5G18270 73.846 2.25e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele13g1321 NAM 6.9e-13 No_clan