Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1290 ATGGATGGGAATAGCTCACGGATTCAAGTGGCCACCTATTTAATCGTATTGGATAGTTATTTCGTGATTTCCTTCCTGATCAGAGCTTGGGACTGGACAGTTAACAAAGTATTTTTAACTTGTCATTGTGCTGTCGGCGCAAGGTCACTTTCTGTCGGCATTGTCTGCATTCGACGATTGAATCTTGCAGCAACAGTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAATTGTACTACTGATATGGTTCTGCTTATTTCACAAGAGCGGTGTTTCTAGAAATTCAGAGACAGGGTCTTCTGATCCTTCACAAGTGGGAAGACACGGTGGGATAGAGCTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTTTCTCAGGCTACAAAAAATTTCAGTGACAAGCATCAGATTGGAGAAGGAAAATTTGGGGAGGTTTACAGGGGTTTACTTCACGAAGGAATTCTTGTAGCCATAAAAAAGCGCCATGGATTCCCTAGTCAGGAGTTTGTAGATGAGGTACACTTCCTATCATCGATTCAACACCGAAATATTGTAGCTCTTTTGGGATACTGCCAGGAAAACAACCTACAGTTTCTCATATATGAATACGTTCCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCTGGTCAACAATCACGTGAGAAGCTGGAATTCAAGCATAGACTTTCAATAGCTCTAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCCTTGAGTCCTCGTTTGGTGCATAAGGATTTCAAAACAGTCAACGTTCTTGTGGATGAAAACTTCGTTCCTAAGGTTGCCGATGCAGGGCTTCTCAACTTCCTAGGAAGAGTTGAAATCGCAGGGCCATCTTCTCAAGTTGCAGTAGATGAAATCTTCCTTGCTCCCGAAGCGAGAGAATTCAGAAGATTTTCTGAAAAGAGTGATGTGTACAGTTTTGGTGTGTTTTTGCTGGAACTGTTAAGCGGCAGGGAAGCAACTGAATCACCATCTTCAGACTCAAATCAGAACCTAGTTGAATGGGTGCAAAGTAAGCAAGAACCTGGGATTATGTCAAACATAGTTGATGAAAGAATGGGAGGCAATTATACAGCAGAAGGCATGGAAGAGTTTATGGCACTGATAGTTCCATGTATTGATACTTCAAGTGAGAGACGACCAACAATGAGCTATGTGGTGATGGAAATGGATCGAATTCTTGAGAAAGAACGGCACTTGACAACAGTGATGGGAGAAGGAACCCCAATTGTGACCCTTGGAAGCCAATTATTTGAAGCTTCAAAATAA 1311 0.4294 MDGNSSRIQVATYLIVLDSYFVISFLIRAWDWTVNKVFLTCHCAVGARSLSVGIVCIRRLNLAATVGGAAGAVALVGIIVLLIWFCLFHKSGVSRNSETGSSDPSQVGRHGGIELTVRDARRFEIEELSQATKNFSDKHQIGEGKFGEVYRGLLHEGILVAIKKRHGFPSQEFVDEVHFLSSIQHRNIVALLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQSREKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKDFKTVNVLVDENFVPKVADAGLLNFLGRVEIAGPSSQVAVDEIFLAPEAREFRRFSEKSDVYSFGVFLLELLSGREATESPSSDSNQNLVEWVQSKQEPGIMSNIVDERMGGNYTAEGMEEFMALIVPCIDTSSERRPTMSYVVMEMDRILEKERHLTTVMGEGTPIVTLGSQLFEASK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1290 436 ProSiteProfiles Protein kinase domain profile. 135 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1290 436 Gene3D Transferase(Phosphotransferase) domain 1 208 421 - -
Lele13g1290 436 Pfam Protein tyrosine and serine/threonine kinase 138 403 IPR001245 GO:0004672|GO:0006468
Lele13g1290 436 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 71 411 - -
Lele13g1290 436 SUPERFAMILY Protein kinase-like (PK-like) 115 407 IPR011009 -
Lele13g1290 436 FunFam Protein kinase superfamily protein 208 421 - -
Lele13g1290 436 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Lele13g1290 436 Gene3D Phosphorylase Kinase; domain 1 101 207 - -
Lele13g1290 436 FunFam Protein kinase superfamily protein 100 207 - -
Lele13g1290 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1290 Lele-ChrLele13 23052610 23059743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1290 61 430 Receptor kinase-like Gene Family AT3G46290 34.351 1.87e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele13g1290 PK_Tyr_Ser-Thr 1.1e-42 CL0016