Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1288 ATGAATCTTCCCTCGAAGAAATCGCAGATCTGGTTGATATTATCAAGCTGTAGTACTGCTATGCCTGAATTTGATGATCAGCAAGAGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGAAGCAGCGAGAGAGTTAAAGAAAGAATCAAACAAGGTGGATCGAAGGCATGGAAAGAGGCCTTTCTCTTCTGATGAAGCATCGGAGGAGGAAAAAAAGCAAGATTTCTTCATTCCTTCTGGATTCACATCGCTATCTCAGACCCAAGCACAAGACAATTATGCCTCTCCCTTTCCCTATCTTATCAGTTCCACTAGTACCAACACCTTCCCAATCCCACAAGTAACAACCTCTTCTGCTTTGATTGAGACTCAGATCAGCTCATCTCCGAATCTACCTCAAGGGAATATTATAGAAAGGAAAAAACATTATAGAGGAGTTAGGCAGAGACCGTGGGGGAAATGGGCAGCCGAAATCCGAGACCCAAACAAAGCAGCAAGAGTGTGGCTTGGCACGTTTGACACGGCAGAGGATGCTGCAGCTGCTTATGATGCTGCAGCTTTGAAGTTCAAAGGCAATAAAGCCAAGCTCAATTTCCCCGAACGTGTAGCTAATTTTCAAGCTCTTGCTCCTCCTCCTCCTCGGCGGCCTCCTCCATCTGAGGCGGCGCCGCTGCCGGATTCTTCTCAACCACCATGGCCACCTCCTCCGTCAGGCGAGGGGTTCCCAAACCTAATGCAGTACGCTCAGGTGCTTTGTAGTAGGGATGATGATGATCTACAACGAGCTGCTTCTGGTCTTTATAGTTATCATCAGAGTGTTAATGAGTCATTTGTTTATGATTCTTCTTCATACTTCTCCTCGTCATCGGCAGTGACTTCGTCTTCTTCCACTACGGCTGGGTCTGATCAATTTCATGGACAAATAATGGGAGATCATGGCTTTTCGGGTTCTTATTATTTTTTTGATAAGGGGACTGATGGTTTTGATGGAAGCCACACGAGGTGA 1014 0.4566 MNLPSKKSQIWLILSSCSTAMPEFDDQQERRRRRRRRRRRRIEAARELKKESNKVDRRHGKRPFSSDEASEEEKKQDFFIPSGFTSLSQTQAQDNYASPFPYLISSTSTNTFPIPQVTTSSALIETQISSSPNLPQGNIIERKKHYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEDAAAAYDAAALKFKGNKAKLNFPERVANFQALAPPPPRRPPPSEAAPLPDSSQPPWPPPPSGEGFPNLMQYAQVLCSRDDDDLQRAASGLYSYHQSVNESFVYDSSSYFSSSSAVTSSSSTTAGSDQFHGQIMGDHGFSGSYYFFDKGTDGFDGSHTR 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1288 337 MobiDBLite consensus disorder prediction 44 75 - -
Lele13g1288 337 ProSiteProfiles AP2/ERF domain profile. 145 202 IPR001471 GO:0003700|GO:0006355
Lele13g1288 337 MobiDBLite consensus disorder prediction 212 243 - -
Lele13g1288 337 MobiDBLite consensus disorder prediction 209 243 - -
Lele13g1288 337 SUPERFAMILY DNA-binding domain 145 203 IPR016177 GO:0003677
Lele13g1288 337 Pfam AP2 domain 145 194 IPR001471 GO:0003700|GO:0006355
Lele13g1288 337 PRINTS Ethylene responsive element binding protein signature 146 157 IPR001471 GO:0003700|GO:0006355
Lele13g1288 337 PRINTS Ethylene responsive element binding protein signature 168 184 IPR001471 GO:0003700|GO:0006355
Lele13g1288 337 SMART rav1_2 145 208 IPR001471 GO:0003700|GO:0006355
Lele13g1288 337 MobiDBLite consensus disorder prediction 22 75 - -
Lele13g1288 337 PANTHER DNA-BINDING DOMAIN 76 283 IPR044808 GO:0003700|GO:0009873
Lele13g1288 337 FunFam Ethylene-responsive transcription factor 2 144 203 - -
Lele13g1288 337 Gene3D AP2/ERF domain 144 204 IPR036955 GO:0003700|GO:0006355
Lele13g1288 337 CDD AP2 144 203 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1288 Lele-ChrLele13 23035190 23036833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1288 142 270 AP2-EREBP Transcription Factor Family AT5G13330 52.941 5.95e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele13g1288 AP2 3e-15 CL0081