Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1285 ATGAGCTGCGGGCCGAGGTTGATTGAAAAGAAACACAGAGTGAGCGAGCTGGAGAGAAGAAGGAGTGGCAGAGGGATTGAAATACCTGATTTTGCAACATTTCTATGGGGTGTGAACCGTGTTAGTCCGAATCAGAGTGCTACTGCTAACGGTGATCCAGGTGCTGGAATGGGGCGTCGTCATTCTGTGGTTTCAACCCCCAAGCGTGATATTGTACCGAATGGTCATAAATGGGACAAGACTGAGGAACCAAATGGTTCGAACAATTCGTCAATTCAGAGAAGAACAAGTCCTCGATTACAAGTCAAGCAAAAAGTGGATACGGAAGTTCCAGTGTGTCGCAGAGATGAGCTGCTCGACAAAGCTAGTGATGCAAATATGAGTTCCTGTAAAACAAACGTTAACGACGAAAATGTTGATAAGCAACAGTTAGTTGGAGGACCAAAGAGAACTAAAAATATGGATAACTCCACAACTAAGAAACCACAAGAGTCTAAGAAGTCTTTAATACAGAGAAGGACTAGCCCTCGAATCCAAGCCAAACAAAAGGTGGATAAGACACTTCCAGTGTCCTGTAGGGTGCAGTTGTCTGGTGACCGAGACGATGCCAGTGATGCGAACAAAAGTAAAACCTGCAAAAGAAGTCGCAATGACGAATATGTGCGTAAAGAAAGTGTTATGGAGGACCAACTGAAAGCTAACAAATTGAATGAGTCAATTATTGAAGAGCCAAATGAGGACAATGAATCGTCAGCGCAAAGGATTGCTAACTCTCGGGTTCAAAATAAGGAATTTCTAGTGCGACGTAGAGTAGAGTTACTAGAGGACCGGGATAACGCTGGTGATGAAAAGAAAAGCAACTGTTTCAAAAGAAGGGTCAATGATGTAATTGGGGATGAACATGGGGGTAAGGAAGGGGAAGTAGGTAAGCCCCCTAGAGTAAAGACGCTTAAAGAGGCTACCTTGGTTCATAACAAACAGACATCCGCGGGTTCGAAAGCAAATGGAGCAGGGAATTTGGCAGATAAAAGGGATTTTGTCAAGGCGAAAGAAACGTTGAGGTTGTTTAACAGTCATTATCTTCATTTTGTTCAGGAGGAGGAGAAGAGGTGTAACAAAGTGGAATCTTCCCGCAAAGCGTCTAAAGGAGGTTCAAAATCTAAGGAGGAGGAGGAGAAGAGGCGTAACAAAGCGGAATCTTCCGTCAAAGCGTCTAAAGGAGGTTCAAAATCTAAGAAAAATGCAACGGTTGAAGTTAAAAAGAATATGGCTAAGCGACCTGATCTGAAAGCATTATCCAAGATGTTGGAAAATAAGGAGACACTGTATCCTGAGAAAAGAATTGGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCGCGTGCTGAAATGGTTGCTGTTGGGTTTCATAGCCACTGGCTAAATGGAATAGATTATATGGGTCAAGCTTATTCCAAAGTGTCACAGTTCAGTCACTATGAATTTCCAATTGCTGTGGCCATTGTTTTGTCGGGGATGTATGAGGATGATCTTGATAATGCTGAGGACATTGTATATACTGGTCAAGGTGGCCATAATTTGAGTCGTGATAAGTGTCAAATTCGGGATCAGGTGTTAGAGCGGGGTAATCTGGCTCTGAAGAACTGCGTGGAGCAATGTGTATCTGTAAGGGTGGTTCGTGGACATGAATCTTCAAGCAGTTACAGTGGCAAAGTATACACATATGATGGCTTGTATAAGGTTGTTAACTATTGGGCAGAAAAAGGATTATCTGGGTTTACAGTCTACAAGTTTCGGCTGAGGAGGCTTGATGGGCAACCAACCCTGACAACTAACCAGGTGTATTTCATTAATGGACGTGCTCCTCAGTCCATTGCTGAAATACGAGGGCTTGTATGTGAGGACATCACCGAAGGTGAAGAGGATGTGCCTATTCCTGCCACTAACCTGATTGAGGAACCCCCAGTTGCACCCACAGGTTTTAAATATAAAAAGTCAATTTTGCTTTCAAAGAATGTAAAGCTCCCCCCAGCTGTCACTGGATGCAAGTGCAAAGGCTCATGTGTGGATCCTACATCCTGTGAATGTGCTTTACGAAATGGATATGATTTTCCCTACGTATCTCGTAATGGAGGGAGGTTAGTTGAAGCCAAAGATATTGTCTTTGAATGTGGGCCAAATTGTGGATGTGGTCATGGTTGTGTTAATCGAACCTCGCAAAGAGGACCAAGATATCGCCTTGAGGTTTTTTGTACTTCAAAGAAAGGATGGGCTGTTAGATCTTGGGATTTTATACCTTCTGGAGCACCGGTTTGTGAATACGCAGGATTAATCAGGAGGACAGAAGATGTAGAGAATACACTAGAGAACAACTATATTTTTGAGATTGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAATGAAACATCTACAGCAGTCAAGCTCTTGGACAATTATGCAGATGATAATTCTGAATCCGCACCGGAGTTTTGTATTGATGCTGGATCAACTGGAAATATTGCTCGATTCATAAACCATAGTTGCGAACCAAATTTATTTGTTCAATGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGTTATTTGCTGCAGACAACATACCACCTTTGCAGGAGCTTACATATGACTATGGCTATGCCCTTGATAGTGTCTTGGGTCCCGATGGGAAAGTAAAGAAAATGATGTGTTATTGTGGAGCTGCTGACTGCAGGAAGCGACTATTCTAA 2784 0.4282 MSCGPRLIEKKHRVSELERRRSGRGIEIPDFATFLWGVNRVSPNQSATANGDPGAGMGRRHSVVSTPKRDIVPNGHKWDKTEEPNGSNNSSIQRRTSPRLQVKQKVDTEVPVCRRDELLDKASDANMSSCKTNVNDENVDKQQLVGGPKRTKNMDNSTTKKPQESKKSLIQRRTSPRIQAKQKVDKTLPVSCRVQLSGDRDDASDANKSKTCKRSRNDEYVRKESVMEDQLKANKLNESIIEEPNEDNESSAQRIANSRVQNKEFLVRRRVELLEDRDNAGDEKKSNCFKRRVNDVIGDEHGGKEGEVGKPPRVKTLKEATLVHNKQTSAGSKANGAGNLADKRDFVKAKETLRLFNSHYLHFVQEEEKRCNKVESSRKASKGGSKSKEEEEKRRNKAESSVKASKGGSKSKKNATVEVKKNMAKRPDLKALSKMLENKETLYPEKRIGDIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGQAYSKVSQFSHYEFPIAVAIVLSGMYEDDLDNAEDIVYTGQGGHNLSRDKCQIRDQVLERGNLALKNCVEQCVSVRVVRGHESSSSYSGKVYTYDGLYKVVNYWAEKGLSGFTVYKFRLRRLDGQPTLTTNQVYFINGRAPQSIAEIRGLVCEDITEGEEDVPIPATNLIEEPPVAPTGFKYKKSILLSKNVKLPPAVTGCKCKGSCVDPTSCECALRNGYDFPYVSRNGGRLVEAKDIVFECGPNCGCGHGCVNRTSQRGPRYRLEVFCTSKKGWAVRSWDFIPSGAPVCEYAGLIRRTEDVENTLENNYIFEIDCLQTMKGIGGRERRSQNETSTAVKLLDNYADDNSESAPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGPDGKVKKMMCYCGAADCRKRLF 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1285 927 MobiDBLite consensus disorder prediction 154 171 - -
Lele13g1285 927 MobiDBLite consensus disorder prediction 45 106 - -
Lele13g1285 927 Gene3D SET domain 628 927 IPR046341 -
Lele13g1285 927 MobiDBLite consensus disorder prediction 367 423 - -
Lele13g1285 927 SUPERFAMILY SET domain 632 904 IPR046341 -
Lele13g1285 927 ProSiteProfiles SET domain profile. 747 897 IPR001214 GO:0005515
Lele13g1285 927 MobiDBLite consensus disorder prediction 198 216 - -
Lele13g1285 927 SMART G9a_1 444 608 IPR003105 -
Lele13g1285 927 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 110 927 IPR025794 GO:0016571
Lele13g1285 927 SMART preset_2 635 731 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele13g1285 927 SMART set_7 747 903 IPR001214 GO:0005515
Lele13g1285 927 Pfam SAD/SRA domain 448 608 IPR003105 -
Lele13g1285 927 MobiDBLite consensus disorder prediction 127 216 - -
Lele13g1285 927 MobiDBLite consensus disorder prediction 367 401 - -
Lele13g1285 927 ProSiteProfiles Post-SET domain profile. 911 927 IPR003616 -
Lele13g1285 927 Pfam Pre-SET motif 638 739 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele13g1285 927 ProSiteProfiles Pre-SET domain profile. 682 744 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele13g1285 927 SUPERFAMILY PUA domain-like 431 617 IPR015947 -
Lele13g1285 927 ProSiteProfiles YDG domain profile. 449 604 IPR003105 -
Lele13g1285 927 MobiDBLite consensus disorder prediction 84 99 - -
Lele13g1285 927 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 96 920 - -
Lele13g1285 927 Gene3D - 432 620 IPR036987 -
Lele13g1285 927 Pfam SET domain 758 897 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1285 Lele-ChrLele13 23012818 23026353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1285 435 927 EF-hand Containing Proteins AT5G13960 64.980 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele13g1285 SAD_SRA 7.2e-49 CL0178