Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1282 ATGATAAATCTTTGGCTGTTCCCACCGACGAACCTCCCCTTCCCCTCCAAATTTTTCATGTCCATCTTGCCCTCACAAGCATCAACCTCATCGTCTTCTCAATCTCCGATATCTCCAAACCCTAATCCCCAATATGGAAACCCCTGTCCCCGGTCTCATTCTCCTCCATCCGTCTCCTCTCCTTTCCTTCAAGTTCCATCCTTCGGATCTCTCCGGATCTCCGATCCGCCATCTCCCGTCGCTATGCCCGACGTCGATTCAGGTCCATCGACTCCAGCTACAGGAGATTCTGCTGGACCTTCCGAAAAGGTGACTGAGTTGGTATCCCCTAGTGGTATGAAGAATTCGCCTCACCAAAACTCCAGAGTACCTTCCCAAAGTCAGTCAAGAAGACGGGCGACTAGATCATCCCAGTCAGCGGGGAAGATGACAGGAACAGTTTATTCTCCTGGAGATCAGCAAAATACTAGGTCTTTAAATCCTCATGGGAGCACCCCTTCAGCAGGAAGAAAATCTCAGATGGTTAATGGTAATCACTTGCTGAACTTTCATTATGATCCCATATCTCGTCCTCAAGCAAGGGGTCCTCCTCCTCCACCACCAAGAAGGCAGCAGAAGAAAAGGCCATACAACAAAGATTTATTTTTACAGGCAAATTACAAATTCGTGGTGTTGGATTCAGGAGACTATTCACCGGAGTCTTTGGACCCAGATAAAATGCTACAGTGGGAAGATATTGTATGTGTGAGGTATTCCACTCCATTCCTGGTTCAGTGTCCAATTTGTTTGGAGTATCCTCTTTGTCCACAAATAACCTCATGTGGACACATTTTTTGTTTCCCTTGTATCTTACAATATTTGATGATGGGTGAAGAGGATAAAAAAGGTGATTGCTGGAAAAGGTGTCCCTTATGTTTTGTCATGATATCTGCAAAGGATTTATATACCATCTACATTGAAAATGTTAATCAGTATCAAGTGGGAGATACCATCGAGTTCAGACTTCTAACTAGGAAAAAGGACTCTTTTACTCTGTCTGATAAAAATAAGGAGATGGATGTCTTATCATGTGGGGACAACAATTTATGTGACCCATTTTCTAAGTTCACACTCACATCAGATGTAGATCTCTCAGTGAGACAGGCAATATCGGATCTAGATGGTTGGCTAGCTAAAGCTGATTCTGGTCTTGTTGATGACTTGGAGAAACTTCCATATGTTTGTGCTGCAATGCAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCAAAGGGCTTGTGATGTTGGAAAATCCTCTAGGCTTATTGATTGTGGACATCACAAACCATCAACAGTTGTAAATGGCACTGATTTTGATGATGAGACTCAGTATTATGGATCAGGACCTTCCTCTACAGATTTCCCCGATCAAGGCAAGGGTATAATAATAGATAATTCAAATGCAAGAGTCTGTCCAGATCAAATGACGGGTGTGGAGAGAAAAGTATTAGATCCAGAAATTAATCTATCTTCTTTCTATGAGGAGAAAACTGATATTCAAAGGCATCCAAATGGTTCAAAGGAGAGTGACTCGTACAATTTTTACCAGGCTGCTGATGGTCAGCATCTCATTCTGCATCCCCTAAACATGAAGTGTCTACTTCACCATTATGGAAGCTATGCTATGCTTCCACACAGAATAAGTGGAAGGATTATGCAATTGGAAACAGTCACTCAGTCAGAGGCAATGAGGAGGCGGTACCGATATTTGAGTCATTTTCCTTTAACTGCGACATTTCAGCTTTGTGAAATTGATTTGAGTGAGATACTGCCTTCTGAATCCCTGGCCCCATTCATGGATGAACTGAAGAAGCGTGCAAACCAGAGGAGGCAACTTGCAAAGAAGGAACGAAAAGAGAAAATCAAGGCTGAAGCTGCTTCTATGCATTGTATTCCCATACCAACCAGTTCTCAGCTGATGTATCGTGACAATTCTCCACCATTCTCCATGGATGATTTTGAAGCTCTGGGGAATTCAACTGTATCATCAAGTCCTCCTGTTGTTGGGGGGAGAAGTTTGTTTTCAAATGTTACGAGACTTGGTTTTGCTGCTGGTCATGATTCCCCATCCTTGAACATTGAAGAAACTAATGGTCTACATAATCATAATGTAACAACTGATTCTTCTGGCTTGACAGGTCTGAGGAATGCGGAGACATCATCATTTGCCAATGTTATATCTAGAGATGAGTCTCTCAATAGCGTAAATGCACCCAAGACAAGTGACTTGGGTAAGAAGGGGAAGAAACCAACTAGAGTTCTTCTTTCAACAGCCGGGGGCAGGCGTTACTGA 2334 0.4289 MINLWLFPPTNLPFPSKFFMSILPSQASTSSSSQSPISPNPNPQYGNPCPRSHSPPSVSSPFLQVPSFGSLRISDPPSPVAMPDVDSGPSTPATGDSAGPSEKVTELVSPSGMKNSPHQNSRVPSQSQSRRRATRSSQSAGKMTGTVYSPGDQQNTRSLNPHGSTPSAGRKSQMVNGNHLLNFHYDPISRPQARGPPPPPPRRQQKKRPYNKDLFLQANYKFVVLDSGDYSPESLDPDKMLQWEDIVCVRYSTPFLVQCPICLEYPLCPQITSCGHIFCFPCILQYLMMGEEDKKGDCWKRCPLCFVMISAKDLYTIYIENVNQYQVGDTIEFRLLTRKKDSFTLSDKNKEMDVLSCGDNNLCDPFSKFTLTSDVDLSVRQAISDLDGWLAKADSGLVDDLEKLPYVCAAMQQLEQRKKYWNEQRACDVGKSSRLIDCGHHKPSTVVNGTDFDDETQYYGSGPSSTDFPDQGKGIIIDNSNARVCPDQMTGVERKVLDPEINLSSFYEEKTDIQRHPNGSKESDSYNFYQAADGQHLILHPLNMKCLLHHYGSYAMLPHRISGRIMQLETVTQSEAMRRRYRYLSHFPLTATFQLCEIDLSEILPSESLAPFMDELKKRANQRRQLAKKERKEKIKAEAASMHCIPIPTSSQLMYRDNSPPFSMDDFEALGNSTVSSSPPVVGGRSLFSNVTRLGFAAGHDSPSLNIEETNGLHNHNVTTDSSGLTGLRNAETSSFANVISRDESLNSVNAPKTSDLGKKGKKPTRVLLSTAGGRRY 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1282 777 MobiDBLite consensus disorder prediction 27 210 - -
Lele13g1282 777 MobiDBLite consensus disorder prediction 51 67 - -
Lele13g1282 777 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 320 IPR013083 -
Lele13g1282 777 ProSitePatterns Zinc finger RING-type signature. 274 283 IPR017907 -
Lele13g1282 777 MobiDBLite consensus disorder prediction 747 777 - -
Lele13g1282 777 CDD RING-HC_RNF10 259 306 - -
Lele13g1282 777 Pfam Zinc finger, C3HC4 type (RING finger) 259 305 IPR018957 GO:0046872
Lele13g1282 777 SMART ring_2 259 305 IPR001841 -
Lele13g1282 777 PANTHER RING FINGER 10 FAMILY MEMBER 113 777 IPR039739 -
Lele13g1282 777 SUPERFAMILY RING/U-box 258 312 - -
Lele13g1282 777 MobiDBLite consensus disorder prediction 108 179 - -
Lele13g1282 777 FunFam RING finger protein 10 252 320 - -
Lele13g1282 777 ProSiteProfiles Zinc finger RING-type profile. 259 305 IPR001841 -
Lele13g1282 777 Coils Coil 613 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1282 Lele-ChrLele13 22992311 22997945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1282 168 711 C3H Transcription Factor Family AT3G26730 56.915 0.0 622