Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1272 ATGATGATGGATCAGCGAGAGAAGCTGCTTCGCAAAAACGAGGCCTCTACTTTTATGGCAGGTGTTGACGCTGAGCTTGCCCTTGTCACCGTCCCACCAGACATCAACATTAATCCCGGGTCGGGTCGCCCTCCGATCCGAGACCTCGGCCTTGTCGCTGCCGTTACCACCTCTTTTGGGACCGTTCATAGGAAGAAAAGGATGGCCAGGCAGAGGAGGTCCTCCACCGTCTCCATGAATCTCCCTCCGCCACCTCCTCCTCCATCCTCCTCCTCCTCCTCGCACGTGCCAATCTCCCTCCCACCTCCTCGTGAAATTGATCATGGGAGGCTGAGATTCCTTTTCCAAAAAGAGCTCAAGAACAGTGACGTAAGCTCCCTCCGGAGGATGGTGCTCCCAAAGAAAGCGGCGGAGGCTTTCCTTCCTATCCTTGAGTCTAAAGAAGGAATTGTTATAAGCATGGATGATTTAGATGGTCTTCATACCTGGAGCTTCAAGTACAGGTTCTGGCCCAATAACAATAGTCGGATGTATGTACTTGAGAACACTGATTTTGATTCTCGTGCTGAGTTCTTTCCAGGGGAATTTGTTAGCTCACATGGCCTACGTCTTGGAGATTCCATAGTGGTTTATCAAGATAATCAAACCCTTAATTATGTGATTCAAGCTAAAAAGGCTTCCGAGCAAGACGATTTTGTGGCTATATCTAGTGATGATAACATCAATGATTTCTTTCTAAGGGAGTATGAGTTTACCAAATCAAATAGTTTGAGTGTGATGACCTATCCCACAATGAATGACACAGACATGTCCTTCATATATGAAACCACATTCTCAAATGATTCTCCTTTCGACTTCCTGGGCGGATCAATGACCAGCTTCTCGAAGATTGGATCAGTCGAGAACTTCGGCTCCGTCGAGAATTTGTCATTGGACGACTTCTATTAA 948 0.4705 MMMDQREKLLRKNEASTFMAGVDAELALVTVPPDININPGSGRPPIRDLGLVAAVTTSFGTVHRKKRMARQRRSSTVSMNLPPPPPPPSSSSSSHVPISLPPPREIDHGRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPILESKEGIVISMDDLDGLHTWSFKYRFWPNNNSRMYVLENTDFDSRAEFFPGEFVSSHGLRLGDSIVVYQDNQTLNYVIQAKKASEQDDFVAISSDDNINDFFLREYEFTKSNSLSVMTYPTMNDTDMSFIYETTFSNDSPFDFLGGSMTSFSKIGSVENFGSVENLSLDDFY 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1272 315 CDD B3_DNA 113 225 IPR003340 GO:0003677
Lele13g1272 315 Gene3D - 111 240 IPR015300 -
Lele13g1272 315 Pfam B3 DNA binding domain 115 223 IPR003340 GO:0003677
Lele13g1272 315 SMART B3_2 115 227 IPR003340 GO:0003677
Lele13g1272 315 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 62 233 IPR044800 GO:0003700
Lele13g1272 315 MobiDBLite consensus disorder prediction 62 101 - -
Lele13g1272 315 ProSiteProfiles B3 DNA-binding domain profile. 115 227 IPR003340 GO:0003677
Lele13g1272 315 SUPERFAMILY DNA-binding pseudobarrel domain 113 222 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1272 Lele-ChrLele13 22925620 22928659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1272 1 315 B3 DNA Binding Superfamily AT3G26790 47.688 1.19e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele13g1272 B3 8.3e-13 CL0405