Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1262 ATGCTTCCGAGCTTTGTTGTTACTGGAGGCATTAAGATGCCTATTGGCTACAGGTTCTGTCCCACCGACGAAGAGCTCATCGTCCACTATCTCCGGAAGATGGCTCTGGGCCTCCCATTACCCGCGAATGTCATTCCTTTTCTCGATGTGTTTCAGACCGATCCCTGGAAGCTTCCAGGTGTTGGCGAATTGGATTCCCTGGAAAAGGGGTATTTCTTCGGCGAGAAGAAGGATATTTTCTATGGAGGCATAATCATCATCGCTGAAGGCACTGGCTTCTGGAAACCCACTGGGAAAGAGAAACTAATTGTTTCTGCTCATACCAACCAAGTTGTCGGTACTAGGAAGACCCTGGTTTTCTGCGGTGGCGACTATTCTAAGGAGACCCAGACCCAATGGGTTATGCACGAGCTTCGCCTCACCGTCCCTGGAATGACTGTTTTCCCACCCAAGATGATGCCATGGACAAAGTGGGCTGTGTACCGCGTTTTTCAGAAGAAGAAGAAGCCCAAGAGAAAAAGGTCTATGAAGAATCAGCCCAACGTCAAGAAAGTTCAGAAGGTGGACGGAGTGAAACCCAGTTTCATTGATTTCGCCGCTGATGGCTATGACTCCGACGAAGCCCCGCCGCCGCCGCCGCCATCTCCAAGTAACAGTGAAGGAAGTGACATCACCGCGTCTAACTAA 687 0.5036 MLPSFVVTGGIKMPIGYRFCPTDEELIVHYLRKMALGLPLPANVIPFLDVFQTDPWKLPGVGELDSLEKGYFFGEKKDIFYGGIIIIAEGTGFWKPTGKEKLIVSAHTNQVVGTRKTLVFCGGDYSKETQTQWVMHELRLTVPGMTVFPPKMMPWTKWAVYRVFQKKKKPKRKRSMKNQPNVKKVQKVDGVKPSFIDFAADGYDSDEAPPPPPPSPSNSEGSDITASN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1262 228 MobiDBLite consensus disorder prediction 169 228 - -
Lele13g1262 228 PANTHER NAC TRANSCRIPTION FACTOR 56 13 179 - -
Lele13g1262 228 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
Lele13g1262 228 ProSiteProfiles NAC domain profile. 13 166 IPR003441 GO:0003677|GO:0006355
Lele13g1262 228 Gene3D NAC domain 22 171 IPR036093 GO:0003677|GO:0006355
Lele13g1262 228 SUPERFAMILY NAC domain 6 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1262 Lele-ChrLele13 22846661 22847649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1262 5 206 NAC Transcription Factor Family AT5G13180 35.000 8.15e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele13g1262 NAM 2.1e-25 No_clan