Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1254 ATGAATCCTGTAATTCTCTTTCTTCTTCTATCTTTGTTTACACAATTTCCGGAAGTTGAGCCTGCAAGACCCAAACCCAAATTTCCTGGGAAGGTGATGCATCCCAACCCCGAAATCACTGTTATGGGCTTTGTTTATTGTGATATCTGCTCCAACAACAGCTTCTCCAAACACAGCTACTTCCTGCCTGGTGCTGAAGTCAGACTAGATTGTGATTTTAAGGCTCTATCAGCTAAAACTGAAGAACAGATATCAGTTTCAGTGAATAGAACAACAAATAAGTATGGGATTTACAAGCTGGAAATACCATCAGTGGATGGAGTGAGATGTGCAGAAGATTCTAAACTAGTGTCTTCTTGCCAGGCAAGTCTAATTGGCAGTTCATCTTCTGCATGCAATATTCCTGGATACAGAACCACTTCTGATGAGATAGCAATCAAAGCAAGACGAGCCAATCTCTGCATATACAGTCTGAATGCTTTGAATTTCAGACCAACCAAAAGGGACATCACCTTATTGATGGGACTTGCCACTGCTGAACAAGTTTTACAGAGCAATTCAGAAGCCAGTGAGAGGAAACTGGCAGGAGCTGGCAAACATAGAAGCACATTGATGTTCTTCCTCTCTTTCCCACGAGATATGAACAAGATCACTTCTTTTTCTGGCAATGAAACTGGCCCGGATAGAACAGATTGTGAATGTATATACAAAGTGAACAAGATCACGACAGGTCGAGCTATGGTTGAAAAGTCAAGGGGGCTTGAAAAAATATATGTTGTTGAAGACATACTCAAGACTTTGATGTTCTACAGTCACTTTCTATGCCTGATATGGGAGGCTCCCAAAAGAGGTGTGAAAGCTCCTGTTGCGGCTGCTAAGAAGAAGCAGGACAAGGTCGTCAACCCACTTTTTGAGAAGCGCCCGAAGCAATTCGGAATCGGAGGTGCATTGCTTCCTAAGAGAGACCTTACTCGATTCGTGAAATGGCCAAAGACAGAAGCTATGCACAGCTTCCTAATTGATGTTTTGTTGAGCTCCTTCATGTATTGCTCTGGCATGAAGACTTATCATTTGATGACGATACCAACTAGCCTCTTCAAGATGCTCCTTAAGTACAGGCCTGAGGATAAGGCTGAAAAGAAAGAGCGGCTATTGAAGAGGGCTCAGGCAGAAGCAGAAGGAAAATCTACTGAAGCTAAGAAACCTATTGTTGTAAAATATGGTCTCAATCACGTCACTTACCTTATTGAACAGATCGTCCATAAGAAAACTGCATCAGTTTTGTGCTTGACAACAGTCAAGAATGAAGACAAATTAGAATTCTCCAAGATTCTAGAGGCGATCAAGGCCAACTTCAATGATAAGTACGATGAGTACAGGAAGAAGTGGGGTGGTGGTATTATGGGTTCTAAATCCCAAGCCAGAACCAAGGCGAAGGAAAGGCTCCTTGCCAAGGAAGCGGCACAGAGAATGTCTTAA 1479 0.426 MNPVILFLLLSLFTQFPEVEPARPKPKFPGKVMHPNPEITVMGFVYCDICSNNSFSKHSYFLPGAEVRLDCDFKALSAKTEEQISVSVNRTTNKYGIYKLEIPSVDGVRCAEDSKLVSSCQASLIGSSSSACNIPGYRTTSDEIAIKARRANLCIYSLNALNFRPTKRDITLLMGLATAEQVLQSNSEASERKLAGAGKHRSTLMFFLSFPRDMNKITSFSGNETGPDRTDCECIYKVNKITTGRAMVEKSRGLEKIYVVEDILKTLMFYSHFLCLIWEAPKRGVKAPVAAAKKKQDKVVNPLFEKRPKQFGIGGALLPKRDLTRFVKWPKTEAMHSFLIDVLLSSFMYCSGMKTYHLMTIPTSLFKMLLKYRPEDKAEKKERLLKRAQAEAEGKSTEAKKPIVVKYGLNHVTYLIEQIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1254 492 Coils Coil 378 398 - -
Lele13g1254 492 Pfam Pollen protein Ole e 1 like 41 139 - -
Lele13g1254 492 PANTHER OS09G0508200 PROTEIN 4 176 - -
Lele13g1254 492 SUPERFAMILY L30e-like 367 457 IPR029064 -
Lele13g1254 492 Gene3D - 418 486 IPR029064 -
Lele13g1254 492 Gene3D - 359 417 IPR029064 -
Lele13g1254 492 PRINTS Ribosomal protein L7A family signature 401 421 IPR001921 -
Lele13g1254 492 PRINTS Ribosomal protein L7A family signature 308 325 IPR001921 -
Lele13g1254 492 PRINTS Ribosomal protein L7A family signature 367 380 IPR001921 -
Lele13g1254 492 PRINTS Ribosomal protein L7A family signature 325 342 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1254 Lele-ChrLele13 22778520 22784615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1254 280 492 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 59.846 1.67e-92 280