Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1249 ATGGAGAATTATACCATATTGTTCCCTGGTCCTACTTCTTCTTCAAGCTATCAAGTGCCGAGGACTGCCATGGGAGGCTCTTATCATCATGGATTTAGTAACTTTGAGGGCCAAGTCTCGAATGGGTTTCTGGGTTTGAGGCCTGATGATCACCAAAGCAGTGATTCGCAGAAAACAGGAGAAGTTATTAGAGATGGGCTACTGTTATCTCAGAGCGGGAATGTGAAGGATGATCATCAGGTGGGTGGTGGTGGTACTGGGAAAAAGAAAGGGGAGAAGAAGGTTAGGAAGCCTAGATTTGCTTTTCAAACTCGGAGCCAGGTTGACATTCTTGATGATGGCTACAGATGGAGAAAATATGGCCAGAAAGCTGTTAAAAACAACAAATTCCCCAGGAGCTACTACAGATGTACTCATCAAGGGTGCAATGTGAAGAAGCAAGTTCAACGTCTAACGAAAGACGAAGGCGTAGTGGTGACCACATATGAAGGAGTTCACACACACCCAATTGAGAAGACGACGGACAACTTCGAGCACATTTTAAGTCAGATGCATGTATATACTCCCGTTTAA 573 0.445 MENYTILFPGPTSSSSYQVPRTAMGGSYHHGFSNFEGQVSNGFLGLRPDDHQSSDSQKTGEVIRDGLLLSQSGNVKDDHQVGGGGTGKKKGEKKVRKPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMHVYTPV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1249 190 MobiDBLite consensus disorder prediction 67 96 - -
Lele13g1249 190 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g1249 190 SUPERFAMILY WRKY DNA-binding domain 103 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g1249 190 FunFam WRKY transcription factor 57 97 171 - -
Lele13g1249 190 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 61 173 IPR044810 GO:0003700
Lele13g1249 190 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g1249 190 Pfam WRKY DNA -binding domain 112 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g1249 190 Gene3D WRKY domain 95 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1249 Lele-ChrLele13 22739104 22740480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1249 99 188 WRKY Transcription Factor Family AT5G13080 85.556 5.62e-56 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele13g1249 WRKY 1.8e-26 CL0274