Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1248 ATGGAGTGGTCATTGTGGGATCCACTGAGATATCAGCCAAACGTTGGTGAGGCCCCGGTGGAGAAATCAGTGTCAGTTGCGGAGACAGAGATGTCGAACTCAAAACCATCATCAAAGATGAAGCGCGTGTACCATAAATCGCCGGAGAGGGTGAAGTGCTCGGTGGATGGATGCGACTTTGACCTGGGGAATTGCCGGGAGTATCACCGGCGGCACAGGGTGTGTCAACCTCACTCCAAGACCTCTTGTGTGTTGGTGAAGGGACTGGAACAGAGATTCTGCCAGCAATGCAGCAGATTTCAATCATTGGATGAGTTTGATGGGTTCAAGCGGAGCTGCAGGAGACGCTTAGAAGGCCATAATAAGCGCAGAAGGAAACCTCGTCATCCATCTGTCTCCTTCTCTGCAGATTACAAAGGACCCAGAATCCTGCAATTTGGGAATCCTACGAGTGATAATCGTTACATGAGTATGTGGAGCTCTCAACCTGCTGGGAGCTACAATCGTTACCCGCCAATTCTGCCAAAGATTGAGATTGAGCAACAGAATGTGGAAGGTCGTTCCTTTGCCAACAACATAGAGAATATGCAGATGAATTGGTATAATAATCAACTAGTCCCGCCATTAGCAGCGGAACAAGGGGGGATCGGAGATAAGAACCAGAAGATGACTTCGGATTCTGCTCTCTATCTTCTGTCAGCACTTCAGGCACAGAGTTCGTCGGAGTTCAGTATGGTAGAGTCAAGTATAGAGTGTCCAATTAAATCGCAAGCTCCATTTGAAGACGACGATGGAACCCCAAACGGTTCGTTTTCAAGGAGTGTGACCAGTGGTTCAAGATTGGGTAAGGATCCTAAAGAAACAAACTTTGATCCCAATGGGACGGAGCCGCAGTTGATGGAACACGTCACGTTCCCTTTCTTCTGGGAGTAA 933 0.4834 MEWSLWDPLRYQPNVGEAPVEKSVSVAETEMSNSKPSSKMKRVYHKSPERVKCSVDGCDFDLGNCREYHRRHRVCQPHSKTSCVLVKGLEQRFCQQCSRFQSLDEFDGFKRSCRRRLEGHNKRRRKPRHPSVSFSADYKGPRILQFGNPTSDNRYMSMWSSQPAGSYNRYPPILPKIEIEQQNVEGRSFANNIENMQMNWYNNQLVPPLAAEQGGIGDKNQKMTSDSALYLLSALQAQSSSEFSMVESSIECPIKSQAPFEDDDGTPNGSFSRSVTSGSRLGKDPKETNFDPNGTEPQLMEHVTFPFFWE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1248 310 ProSiteProfiles Zinc finger SBP-type profile. 50 127 IPR004333 GO:0003677
Lele13g1248 310 Pfam SBP domain 53 126 IPR004333 GO:0003677
Lele13g1248 310 SUPERFAMILY SBT domain 51 131 IPR036893 GO:0003677|GO:0005634
Lele13g1248 310 Gene3D - 25 114 IPR036893 GO:0003677|GO:0005634
Lele13g1248 310 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 36 239 IPR044817 GO:0003677
Lele13g1248 310 MobiDBLite consensus disorder prediction 256 302 - -
Lele13g1248 310 MobiDBLite consensus disorder prediction 267 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1248 Lele-ChrLele13 22733595 22734709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1248 53 169 SBP-box Gene Family AT5G50670 46.617 5.36e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele13g1248 SBP 1.5e-28 No_clan