Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1242 ATGGAGATAAGAAGAACGATAATGGTTTTGATGATGTTAATGGGTTTTGCGATGATGTTGGGGGGAGAAGCACAACTAGTGGAAAATTTTTACAGTTCGACATGTCCAAACGTTGAAGCCATCGTAAACCAAGCAGTCACCAATAAGTTGGCTCAGACCTTCACCACCATTCCTGCAACTCTTCGTCTCTTCTTCCATGACTGCATGGTTGAGGGATGTGATGCTTCGGTGATGATCGCATCGCCGAATGGGGACGCAGAGAAGGATGCTTCCATTAATCTATCGCTGGCCGGAGATGGGTTCGACACGGTGGTCAAAGCAAAAGAAGCTGTGGAAGCTCAATGCCCCGGTGTGGTCTCATGCGCAGACATTTTAGCACTCGCCGCCAGAGACGTTGTTGTCTTGGTCGGAGGCCCTTCATTCAACGTAGAACTAGGACGCAGGGATGGCCTAGTTTCGAGTGCTTCTCGGGTGGAAGGAAACTTGCCGAAAGCAAACTTCAATCTGAACCAACTCAACGCGATGTTTAGTCGTCACGGTTTGAGCCAAACCGATATGATAGCCCTGTCCGGAGCACACACAGTGGGGTTCTCTCACTGCAACGAGTTCACCGATCGGCTTTACTCTTCTCCGGTGGACCCTACTATGGACTCCGGCTTCGCCCAACAGTTGATGTCACAATGCCCCAGAAATTTTGACCCACTAGTGGCCATCGACCTGGATGTTCAAACCCCAAGAGCGTTCGACAATTTGTATTACCAGAACTTGGTTTCAGGGAAGGGGTTGCTGAGTTCGGATCAGGTGCTGTTTACTGACTCGAATTCACAGTCGACGGTGGTTGAGTTCGCCAACAACCCTGCTGAATTCAATGCAGCGTTTGCCAATGCCATGAGGAAGCTTGGGAGGGTAGGGGTCAAGACTGGGAATGAAGGAGACATTAGGGTTGATTGTACTAAATTCAATTCTTCGTGA 972 0.4949 MEIRRTIMVLMMLMGFAMMLGGEAQLVENFYSSTCPNVEAIVNQAVTNKLAQTFTTIPATLRLFFHDCMVEGCDASVMIASPNGDAEKDASINLSLAGDGFDTVVKAKEAVEAQCPGVVSCADILALAARDVVVLVGGPSFNVELGRRDGLVSSASRVEGNLPKANFNLNQLNAMFSRHGLSQTDMIALSGAHTVGFSHCNEFTDRLYSSPVDPTMDSGFAQQLMSQCPRNFDPLVAIDLDVQTPRAFDNLYYQNLVSGKGLLSSDQVLFTDSNSQSTVVEFANNPAEFNAAFANAMRKLGRVGVKTGNEGDIRVDCTKFNSS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1242 323 Gene3D - 29 321 - -
Lele13g1242 323 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 CDD secretory_peroxidase 25 320 IPR033905 GO:0004601|GO:0042744
Lele13g1242 323 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PANTHER - 8 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Lele13g1242 323 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 FunFam Peroxidase 29 175 - -
Lele13g1242 323 Gene3D Peroxidase, domain 2 163 300 - -
Lele13g1242 323 ProSiteProfiles Plant heme peroxidase family profile. 25 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele13g1242 323 FunFam Peroxidase 163 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1242 Lele-ChrLele13 22712062 22713541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1242 7 321 Peroxidase AT5G14130 64.263 8.80e-146 414