Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1233 ATGCCGGAGGAGCCCACGGCGATCGACTATGTCATGGAGGCTGCCTCTGGGCCCCACTTCTCTGGCCTCCGTCTTGACGGTCTCCTCTCGTCTCCGACTTCTTCTTCTGCTTCATCACCTGCTCATCGATTTGCTTCCGCTGCCGCTTCTGCTTTGGATTCAACCCTACCCTCTGATTCTACTCCCACACGGCCCTTCGTTATCGGTGTTTCGGGAGGTACTGCTTCAGGGAAGACCACTGTATGTGACATGATAATCCAACAGCTTCACGATCACCGCGTTGTGCTAGTCAATCAGGATTCGTTTTATCGTGGTTTGACGCCTGAAGAATCGGAACGTGCACACGAGTACAATTTTGATCACCCTGATGCTTTTGACATTGAGCAACTATTAGAATGCATGCAAGAACTCATAAGCGGCCACTCAGTTCAAGTCCCAATTTATGACTTTAAGAAGCACCAGCGCTCTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATTTTGGAGGGCATTCTTGTGTTCCATGACCAACGTGTTCGTGATTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTCGCTCGTAGAATTCGACGTGATACAGTGGAGAGGGGTAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAGCCTGCCTTTGATGATTTTGTTCTTCCATCAAAGAAATATGCTGATGTGATCATCCCCAGAGGAGGTGATAATCATGTTGCCATTGATCTGATTGTCCAGCATATCCACACAAAACTTGGTCAGCATGATCTATGCAAAATATATCCGAATGTGTATGTTAGTCAGTCAACATTCCAGATAAGGGGGATGCACACGTTGATTCGGGACAAAGACATATCAAAGCATGACTTTGTATTTTATTCAGACCGACTCATACGTCTGGTTGTTGAGCATGGCCTTGGCCATTTGCCGTTCACTGAAAAGCAAGTGGTCACTCCAACAGGATCTGTCTATACTGGTGTTGACTTCTGCAAAAAATTGTGTGGCGTTTCTATTGTCCGAAGTGGTGAGAGCATGGAGAATGCTCTACGAGCATGTTGCAAAGGCATAAAAATTGGAAAGATTCTGATTCATAGAGATGGAGACAATGGACAGCAGCTCATATACGAGAAACTTCCCAAGGATATATCAGAACGGCATGTCTTGCTTCTTGACCCTGTCCTGGCTACCGGTAACTCTGCAAACCAGGCAATTGAGCTACTCATACAGAAAGGAGTTCCAGAATCCCACATAATATTCCTGAATCTCATCTCTGCACCGGAGGGAATCCATTGTGTCTGTACAAGGTTTCCATACTTGAAAATTGTCACATCCGAGATTGATGTTGCCTTGAATGAAGAGTTCCGTGTTATCCCAGGATTGGGCGAGTTTGGTGATCGCTACTTCGGAACTGACGATTGA 1461 0.4552 MPEEPTAIDYVMEAASGPHFSGLRLDGLLSSPTSSSASSPAHRFASAAASALDSTLPSDSTPTRPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESERAHEYNFDHPDAFDIEQLLECMQELISGHSVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVSQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGQQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCTRFPYLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1233 486 CDD UMPK 67 265 IPR000764 -
Lele13g1233 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 258 IPR027417 -
Lele13g1233 486 Gene3D - 269 484 IPR029057 -
Lele13g1233 486 CDD PRTases_typeI 342 444 IPR000836 -
Lele13g1233 486 TIGRFAM udk: uridine kinase 66 265 IPR000764 -
Lele13g1233 486 PANTHER URIDINE KINASE 56 395 - -
Lele13g1233 486 Gene3D - 62 268 IPR027417 -
Lele13g1233 486 PRINTS Uridine kinase signature 140 155 - -
Lele13g1233 486 PRINTS Uridine kinase signature 197 207 - -
Lele13g1233 486 PRINTS Uridine kinase signature 65 82 - -
Lele13g1233 486 PRINTS Uridine kinase signature 211 222 - -
Lele13g1233 486 PRINTS Uridine kinase signature 233 246 - -
Lele13g1233 486 PRINTS Uridine kinase signature 95 106 - -
Lele13g1233 486 FunFam Uridine kinase 269 484 - -
Lele13g1233 486 Pfam Uracil phosphoribosyltransferase 283 484 - -
Lele13g1233 486 FunFam Uridine kinase 62 268 - -
Lele13g1233 486 Pfam Phosphoribulokinase / Uridine kinase family 67 253 IPR006083 GO:0005524|GO:0016301
Lele13g1233 486 SUPERFAMILY PRTase-like 268 485 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1233 Lele-ChrLele13 22650983 22656136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1233 1 486 PRT Gene Family AT3G27190 86.037 0.0 842