Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1231 ATGTCACGAATTATATACTTGGACAATAATTCTCCTTTTCTCTGTGCTACCCTTAAATCTCATCTGACTTTTTACTTACTAACTCGTACTCCTGGTTTCTCTCAACCTGAGCTTTCTCTCTGGAATCAATCCGCTTGTGATTTCAGAAGCACGTGGGTTTGTTCGTTCACCTATCTGGTAAGTGAAGGTGATGCAATCTTCTACAGGAGCTATTGCTTTTGTAATGCATCATGGGGAAGCTTTAGACCCGAAAGCCTTGCTCTATTTTCCTCTATTCTTGTTTCTCTAGCTAAACCATGCCTTAGTCCACACAAGAAGTTAAACATGTGGAACACTGAGCTCTGTATTGGTTTAGCTGGGGGTGTAGTTGGCATTTGGGTTGTTTTTGCAGCAGCCATCATTGTAATCAGATTAAAGAACGGAAAGGAAGAGAATGGGATTGGGAAAGAAGGAGACTTGGAGCTTCAGCATGTCAACCTCAGTGTCAGAACAATCTGCGACAAGAAGGTTTCTTTTGAGTGGTCTCCCGTCACTCTTAAAGGGAAAATTATCGACACCACACCACGTAAGATGCTCCTGGAGACATACACTATTGAAGAGTTGAGGAAAGCAACTGAGGACTTCAATTCAACTAATCAAATCGAGGGACCTGTGTTTCAAGGTCGTCTCAATGGGAAGAGCGTGGCAATCAAGCGCACAAGCACACAGACACTGGCAAAGATTGATTTTGGACTCTTCGATGACGCACTTCACCACCACCCCAACATCCTTAAACTTCTCGGAACGTGGTCAACAGAGGGTCCGGGTCATGAATCATATCTGGTTTTTGAATTTGCAGAAAATGGATCTCTGAGAGACTGGCTTCACTTTGGGTTGGCCATCAAGAACGAGTTCATTGCTTCCTGCTATTGTTTCCTTTCATGGAGCCAGCGGCTAAGGATCTGCCTTGATGTGGCCAAGGGTTTGCAGTATATGCACCACATGATGAACCCAAGCTACGTGCATAGACACGTGAAGAGCGGAAACATATTTTTAGACGAAGACTTTGGAGCAAAGATAGGGAATTTCGGAATGGCAGGGTGTCTTGAGAATGGAAGAGAGGACCCACTTTCTTATTCAACCAATCCTTGGAGCTTAGGCTATTTGGCCCCTGAATATGTTCACCAAGGTCAAACACCCATAAGGAAGCCCAATGAGAAAGGAGAAGGAAGCATTTGGCTCACAGAGAAATTCAAGGCCATTTTGAAGTCAGAGAATAATGTGGATGAACTAAGGGAATGGATGGACAGTGCATTGGGTGAGAATTACTCATTCGATGCAGCTGTCACCGTTGCAAAACTTGCAAGAGCTTGTGTAGATGAAGACTCCTCTCGCAGGCCAAATGCTGGGGAAGTTGTTGAGAAGCTATCAAGGTTGGTTGCAGAATTACCTGAAGAGGAACATTTGTTATTGTCCGAAAGCTCAACCAAACCGCTGGCCAAGACACCTGCAAACAATCACTGA 1503 0.4444 MSRIIYLDNNSPFLCATLKSHLTFYLLTRTPGFSQPELSLWNQSACDFRSTWVCSFTYLVSEGDAIFYRSYCFCNASWGSFRPESLALFSSILVSLAKPCLSPHKKLNMWNTELCIGLAGGVVGIWVVFAAAIIVIRLKNGKEENGIGKEGDLELQHVNLSVRTICDKKVSFEWSPVTLKGKIIDTTPRKMLLETYTIEELRKATEDFNSTNQIEGPVFQGRLNGKSVAIKRTSTQTLAKIDFGLFDDALHHHPNILKLLGTWSTEGPGHESYLVFEFAENGSLRDWLHFGLAIKNEFIASCYCFLSWSQRLRICLDVAKGLQYMHHMMNPSYVHRHVKSGNIFLDEDFGAKIGNFGMAGCLENGREDPLSYSTNPWSLGYLAPEYVHQGQTPIRKPNEKGEGSIWLTEKFKAILKSENNVDELREWMDSALGENYSFDAAVTVAKLARACVDEDSSRRPNAGEVVEKLSRLVAELPEEEHLLLSESSTKPLAKTPANNH 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1231 500 ProSiteProfiles Protein kinase domain profile. 139 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1231 500 Pfam Protein kinase domain 250 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1231 500 Gene3D Phosphorylase Kinase; domain 1 184 278 - -
Lele13g1231 500 Gene3D Transferase(Phosphotransferase) domain 1 279 481 - -
Lele13g1231 500 SUPERFAMILY Protein kinase-like (PK-like) 189 469 IPR011009 -
Lele13g1231 500 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 407 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1231 Lele-ChrLele13 22638147 22640159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1231 152 494 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 44.086 8.79e-88 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele13g1231 Pkinase 5.1e-19 CL0016