Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1228 ATGGTTTCTGGCTTGAAAGCAAAGAGCAGGAGAAGTGCTAGTGTTAAAATTAATTACGTCCTTCATATCGAGGAAATCAAACCTTGGCCCCCGTCACAGTCTCTAAGATCCGTTCGTTCTGTACTGTTACAATGGGAGAATGGTGAACGCTATTCAGGTTCTACCAGTCAGGTTGTACCGTGGCTGGGTTCTGATACAGATGAAGGAAAAATCGAATTTAACGAGTCGTTTAGACTTCCTGTAACTCTGTTGAGGGATATGTCCATTAGAGGTGGTAAGGCTGATGTATTCCAAAAGAATTGCTTGGAGTTCAACTTGTATGAGCCCCGAAGAGATCAGACTCTTAAGGGTCAGTCGCTGGGGACTGCCATCATAGACTTGGCAGATTATGGTATACTTAAGGAGACTTTGAGCATTAGTGCTCCGATGAACTGCAAGAGGAACTACAAAAACACAGGTCAGCCACTTCTATTCATAAAAATTCAGCCTGCTGAAAAGAGTCGTGCTAACTCCTTGTCAAGGGACAGTTTGTCAAAAGTGGGGCCAAAGGACGTTAATGGTGGTGACTCAACATTGATGAATGAAGAATACACTGAAGAAGCTGAGATTGCCACTTTTTCTGATGATGATGTTTCTTCACATTCGTCTGTGGCAGCTGTTGCTTCTGCCCTAGAGGCCAATAGGTGTATACCTGCTGAACTTGTAGAGAATGGATCAACTCAAAAGACTGATAGGGGTAACAAGGAGCATCTGGCAAGGCTTGAAAAATCAAATATGATGCCACAAGATACATGCCAAAAGCTGGAGAGGAGTTCATCAAGCACATCATCATTGGATGTATCATCTGATCTCGGGAGTCCGGTAAATGGTTGTGCTTCTTCTAATTCCACTAATTGTAATTCAGTGACCACTCAAAAACGTGCTGTTAGCCCAAATGCTTATTCTTCTTATCCATCTTTGGCTCATGACAAATTAGAGGCAGATTTCAAGATCAAGACTAGAAATGGTGGTAGTAGACATTCAGATGAGGAGATTCATGAAAAGGTTGTTAATCATAGAAATACAGTTACAGATGTTCAAATGTACAGCAAGAATCCAGGTGCTGTAAATTGTGACGTTTCTGAAGTCATTGATAAATTCGATGGGACATATGAGGAAGCTGACAAATATTGTGTGAAGGAGGAAGGAGATGGTAAATTTTACAATAGTTATGTTGAGGACAAGCGTGGAACTGAAAATTATAGTTTGTGTAAGAAAAACTGCACAGAAAATGAAAAATCAGCAGCACGAGGTGCCAAAGATCATGCCTTATTGAGTAGCAGTTCATATCCCTTAGGCGGGGCAAACATTATAAAAGGTGAAAAATTAAAGCATGTAAAGTCAGTGAGGTCACCAGCAGACTCAGCTAGGATTACAGGATCACTGGGTAGTTATCATAATTTGGATGTGAAGGAAATTGGCATTGTTGGAGATGCACAAAACTGTGGAGGAAACATCAGAAGCCACGATAAAAAAGATGCTAAAATTTATCCAAGGGAAGTGAGAATGACCATTCTAGACAGCAAAGTTGAGCATTTAGAAAACAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGTTGCAACAATTGAGGCTTCTTTATATTCAGTAGTTGCAGAGCATGGAAGCTCCATGAGTAAGGTCCATGCTCCAGCACGGCGTCTTTCTAGGCTGTATCTCCATGCTTGTAAAGAAAACCTTCGAGCAAGAAGGGCTGGGGCAGCCAAAAATGCTGTTTCTGGGCTAGTCCTTGTCGCTAAGGCATGTGGAAATGATGTCCCAAGGCTGACATTTTGGTTGTCTAATATCATTGTGTTGAGGACAATTATATGCCAAACTTCCAAAGACATGGTACAATCAGTTTCTGCAGATTCTAGTGTAAAAAGGAAAAGTGAGGGAGAGAGGAATGGCAAGACAACACACTCATTACGATGGAAGGGGTCTTCACCTGGTGAAAATGAAAATTCAGCACCAGAACACAGTGGTTTTGGTAACTGGGATGAACTCCATGTGTTCACGTCAGCACTGGAAAAGGTAGAAGCCTGGATATTCTCTCGCATAGTGGAATCTATCTGGTGGCAGACTCTGATTCCACACATGCAACCTGATGCAATAGCCACTAAAAAGGATGTGGACTCTGCCTCAAGGAAAAGCTATAGAAGGATGCCTAGCTCATGTGATCAGGAGCAGGGGAACATTTCACTAGATATTTGGAAGAATGCTTTTAGGGAATCCTGGGATAGGCTCTGTCCCATTCGAGCTGGAGGGCATAAATGTGGCTGTTTGCCTGTGCTGTCTAGATTGATAATGGAGCAATGTGTGACAAGATTAGACGTGGCTATGTTCAATGCCATTCTTCGTGAATCTGCTGATGAAATCCCTACTGATCCTGTATCTGATCCCATTAGTGATCCCAAGGTTCTCACCGTCCCACCTGGGCAATTGAGCTTTGGAGCTGGGGCACAGCTTAAAACTGCGATTGGAAACTGGTCTAGATGGTTGACTGACTTGTTTGGTATGGATGACGATGATTCATTTGAAGATAAGGACGATCCTGATGACAATGATGGGAGACAAGATACATCCTTGAAGTCCTTCCATCTTCTAAATGCATTAAGTGACCTTCTGATGCTTCCCAAGGATATGCTTTTAAGTTCTTCGGTCAGGAAAGAGGTATGCCCAAAGTTTAGCGCACCACTTATCAAGAGGATTCTAGACAATTTTGTTGCAGATGAGTTTTGCCCAGATCCAATCCCTACCGTTGTTTTTGAAGCCCTGGACTCAGAGGATGATCTCGACGAGGGTGGTGAGGAGTGCGTTAGAACCTTCCCATGCAATGCAGCTCCAATTGAGTACTTACCTCCTCCGGCAACTTCCATTGTCGCCATTATTGGGGAGATTGGAAGTGAACGTCAACTAAGAAGCAGCAGATCATCTGTTGTGAGGAAGGCTTACACCAGCGATGATGAGCTTGATGAACTAAATTCCCCTTTATCTTCAATCCTAATTGATGTCTCCGCGTCTTCAGTGGCTTCAACAAAACCAAGCTGGGAAACCAAAGAAATTCGAAACGGATCTACTCTCAGATATGAACTAGTCAGGGACGTATGGATGAGTAGCGACTAG 3165 0.4288 MVSGLKAKSRRSASVKINYVLHIEEIKPWPPSQSLRSVRSVLLQWENGERYSGSTSQVVPWLGSDTDEGKIEFNESFRLPVTLLRDMSIRGGKADVFQKNCLEFNLYEPRRDQTLKGQSLGTAIIDLADYGILKETLSISAPMNCKRNYKNTGQPLLFIKIQPAEKSRANSLSRDSLSKVGPKDVNGGDSTLMNEEYTEEAEIATFSDDDVSSHSSVAAVASALEANRCIPAELVENGSTQKTDRGNKEHLARLEKSNMMPQDTCQKLERSSSSTSSLDVSSDLGSPVNGCASSNSTNCNSVTTQKRAVSPNAYSSYPSLAHDKLEADFKIKTRNGGSRHSDEEIHEKVVNHRNTVTDVQMYSKNPGAVNCDVSEVIDKFDGTYEEADKYCVKEEGDGKFYNSYVEDKRGTENYSLCKKNCTENEKSAARGAKDHALLSSSSYPLGGANIIKGEKLKHVKSVRSPADSARITGSLGSYHNLDVKEIGIVGDAQNCGGNIRSHDKKDAKIYPREVRMTILDSKVEHLENKIKMLEGELREVATIEASLYSVVAEHGSSMSKVHAPARRLSRLYLHACKENLRARRAGAAKNAVSGLVLVAKACGNDVPRLTFWLSNIIVLRTIICQTSKDMVQSVSADSSVKRKSEGERNGKTTHSLRWKGSSPGENENSAPEHSGFGNWDELHVFTSALEKVEAWIFSRIVESIWWQTLIPHMQPDAIATKKDVDSASRKSYRRMPSSCDQEQGNISLDIWKNAFRESWDRLCPIRAGGHKCGCLPVLSRLIMEQCVTRLDVAMFNAILRESADEIPTDPVSDPISDPKVLTVPPGQLSFGAGAQLKTAIGNWSRWLTDLFGMDDDDSFEDKDDPDDNDGRQDTSLKSFHLLNALSDLLMLPKDMLLSSSVRKEVCPKFSAPLIKRILDNFVADEFCPDPIPTVVFEALDSEDDLDEGGEECVRTFPCNAAPIEYLPPPATSIVAIIGEIGSERQLRSSRSSVVRKAYTSDDELDELNSPLSSILIDVSASSVASTKPSWETKEIRNGSTLRYELVRDVWMSSD 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1228 1054 Coils Coil 516 543 - -
Lele13g1228 1054 MobiDBLite consensus disorder prediction 640 654 - -
Lele13g1228 1054 MobiDBLite consensus disorder prediction 634 673 - -
Lele13g1228 1054 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 514 1051 IPR021827 GO:0005643
Lele13g1228 1054 MobiDBLite consensus disorder prediction 655 673 - -
Lele13g1228 1054 MobiDBLite consensus disorder prediction 259 283 - -
Lele13g1228 1054 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Lele13g1228 1054 MobiDBLite consensus disorder prediction 169 191 - -
Lele13g1228 1054 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 12 134 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1228 Lele-ChrLele13 22626901 22632351 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0596 07 3401805 3402221 Lele13g1228 13 22626901 22632351 CCT
Lele05g0567 05 3327971 3334711 Lele13g1228 13 22626901 22632351 CCT
Lele13g1228 13 22626901 22632351 Lele15g1231 15 7126563 7132026 hybridization
Lele13g1228 13 22626901 22632351 Lele16g1263 16 7148864 7154995 hybridization