Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1227 ATGAGCATTAAATGTGAGGACAATTCTGTAACAGAGCTTAAAATCATGGGAGATAAACCTGTGAAGGCCAAAGAGTTCAATGGGCTAGCAATTCCTAACCAAACATTGTCTGAGAGTTTCTCTATTGATTCTTTTGTCACCACATTGGTAAGGTTAACCAGCTTGGGGGTTCTTAGCTTGGTGTCACTGGGAATTTGGGGGCCACTCCCTGATAAGATTCACCGATTATCTTTACTTGAAATTCTGGACTTGAGCTCGAATTTCTTATACGGTACAATCCCACCAAAAATGTCTACAATGGTAAAGCTTCATACTCTAACCATTAATGCCAATTATTTCAATAGCACTATGCCGGATTGGTTTGATTCATTATCTAATCTACAAGCTTTGAGTTTGAATAGCAATCGCTTGAAGGGTTCATTCCCCTCTTCACTATGCAAAATTAAAACGCTTACTGGCATTTCCTTGTCTCACAATGACTTGTCTGGTAAATTGCCTGATCTGAGTACTCTCACCGGCTTACATGTGCTGAATTTAGGAGATAATCATTTAGACTCTGAACTACCATTGATGCCCAAATCAGCAGTTACGGTTCTCCTAAGTAAAAATTCATTTTCTGGCAAGATACCGAATCAGTTCGGTGAACTGGTTCAGCTTCAACATCTAGACCTTTCATCAAATCATCTCTATGAGATTCCCCCATCCCAATTGTTCTCTTTGCCTAACATCAGATTCATGAATTTGGCAAGCAATACTCTGAGTGGGTCCCTTCCAAACCAACTAACATGTGGAAGCAAACTTGGGTATGTGGATATTTCTAGCAACAAGCTAATTGGTGAGCTTCCTTCTTGCTTGGCAAGCACGTCTGATAGAAGAGTAGTGAAATATGGTGGGAATTGCTTGACTGTTGATTCTCAAGAATCTCAACATCAGACACGAGGGTCTTACTGTAAACAGCCCAGCGTAAAGAAGTCCCAGGCACTCAAAATAGTTGTAGCTGTGGCCATTATTACTGGACTAGCGCTAATTCTTGTGCTTTTTGTGTTTGGTGTTTTCTTTTGTTGCAAGAGATGCCATTTGAGAAAAACATCTGGGCAGCATGCGTTGCCAAAAAGAGTAAGAGATAATTCTGCAACAGGGGTTTCCTCTGAACTCCTTGCAAGTGCCAGATTCATTTCTCGGGCAGTGAAGCTTGGAGCACAGGCTATTCCAGTCTGTCGAGTGTTTTCAATTGAAGAGCTGAAGGAAGCCACGAGAGATTTTCATGTGTCAACTTATATGGGTGAAGGCTCCATAGGGAAGTTGTACAAAGGTAAACTGGAAAATGGACCCTATGTAGCAATACGATCTTTGTCTCTCTCAAAGAAATGCTCAATTCAAAATCTTCAGGGTCGGCTGGATTTACTCTCAAAGCTTCACCATCCTAATTTGGTTAGCCTCTTGGGTCATTGTATAGATGGCGGTGGACAAGATCATTCCAGTACCCTCAAACTTCATCTTGTATACGAGTATATACCTAATGGCAATTATCGTGACCATCTGTCAGAATTTTCTCCAGAGAAGGCACTCAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCCAAGGCAGTGCATTTCTTACATACCGGGGTGATACCTGGCTGTTTTAGAAACCAATTAAAGACAAACAATATTTTGCTTGATGAGCATCACATTCCCAAAGTAAGTGATTATGGGATGTCCCTCATCAGAGAAGAGATTGAAAAACTTGAGGCATCTTTTGGGAGTCAAGATGGGCGAAGAAAGGTAGTGGATCCAATAGTGTTGACCACGTGCTCTCAAGAGTCATTATCAATTGCAGTATCTATAACAACCAAATGCATATCCACAGAACCTTCATGTCGTCCCTCTTTTGAAGATGTCCTTTGGAACTTACAATACGCAGCTCAAGTCGAGGCCACTGCAGATGCAGATCAGAAATCAGATTCTACATGA 1980 0.4126 MSIKCEDNSVTELKIMGDKPVKAKEFNGLAIPNQTLSESFSIDSFVTTLVRLTSLGVLSLVSLGIWGPLPDKIHRLSLLEILDLSSNFLYGTIPPKMSTMVKLHTLTINANYFNSTMPDWFDSLSNLQALSLNSNRLKGSFPSSLCKIKTLTGISLSHNDLSGKLPDLSTLTGLHVLNLGDNHLDSELPLMPKSAVTVLLSKNSFSGKIPNQFGELVQLQHLDLSSNHLYEIPPSQLFSLPNIRFMNLASNTLSGSLPNQLTCGSKLGYVDISSNKLIGELPSCLASTSDRRVVKYGGNCLTVDSQESQHQTRGSYCKQPSVKKSQALKIVVAVAIITGLALILVLFVFGVFFCCKRCHLRKTSGQHALPKRVRDNSATGVSSELLASARFISRAVKLGAQAIPVCRVFSIEELKEATRDFHVSTYMGEGSIGKLYKGKLENGPYVAIRSLSLSKKCSIQNLQGRLDLLSKLHHPNLVSLLGHCIDGGGQDHSSTLKLHLVYEYIPNGNYRDHLSEFSPEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFRNQLKTNNILLDEHHIPKVSDYGMSLIREEIEKLEASFGSQDGRRKVVDPIVLTTCSQESLSIAVSITTKCISTEPSCRPSFEDVLWNLQYAAQVEATADADQKSDST 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1227 659 Pfam Protein tyrosine and serine/threonine kinase 423 578 IPR001245 GO:0004672|GO:0006468
Lele13g1227 659 SUPERFAMILY Protein kinase-like (PK-like) 403 640 IPR011009 -
Lele13g1227 659 Gene3D Ribonuclease Inhibitor 2 194 IPR032675 -
Lele13g1227 659 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 96 188 - -
Lele13g1227 659 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Lele13g1227 659 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Lele13g1227 659 ProSiteProfiles Protein kinase domain profile. 421 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1227 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 34 579 - -
Lele13g1227 659 SUPERFAMILY L domain-like 48 302 - -
Lele13g1227 659 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 384 504 - -
Lele13g1227 659 Gene3D Transferase(Phosphotransferase) domain 1 397 654 - -
Lele13g1227 659 SMART LRR_typ_2 76 100 IPR003591 -
Lele13g1227 659 SMART LRR_typ_2 216 240 IPR003591 -
Lele13g1227 659 SMART LRR_typ_2 124 148 IPR003591 -
Lele13g1227 659 SMART LRR_typ_2 171 194 IPR003591 -
Lele13g1227 659 Gene3D Ribonuclease Inhibitor 195 326 IPR032675 -
Lele13g1227 659 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 195 322 - -
Lele13g1227 659 ProSiteProfiles Leucine-rich repeat profile. 218 239 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1227 Lele-ChrLele13 22620551 22623924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1227 1 598 Miscellaneous Gene Families AT5G14210 58.113 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele13g1227 PK_Tyr_Ser-Thr 4.1e-18 CL0016