Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1225 ATGGCGTTGCATTGTGCAAAATACGCCACGCGACTGCTCGATTTTGCTGCGGCATCTGAGTCGTACAAAGCACGCGCGAACCCTTGCCTGAGGTTGTATCTATCAGCAGCGGAGGCGCGACTCTACTGCAGCTTCGAGCTCACCCTAGCTGTTCGTCGGACAATGACGGTATTTTCCGGCAAGCAGGTGTTTCCGGTGGACTACGAGGCAGAGGTGTCGCAGCGCCTCCTCGAAGCTTGTCACTCCGGGGATCAGAACTTGGCCTTAGAGTGCGTTGCTGATCCATTCGTTGACGTCAACTTCTTTGGCGCAGTGAGCTTGAAGATCAGAAAGGCCGAGCTGGTTCTACACGAGGAATCGGCTAGCGAAGTTCGCTTTGAGTTCGAAGAGTTCAAGACCGACGTCACTGCTTTGTTTCTTGCTGTTCATACGGGGAATGCGAGCCTCGTGAAGAAGCTACTGAGTATGGGAGCTGATGTAAACCAGAAACTCTTCAGAGGCTTTGCAACAACTGCAGCAGCGAGGGAGGGCCACATTGATATTCTTGAGATCTTGCTTAAAGTTGGGGCATCACAGCCAGCATGTGAAGAAGCTCTTTTAGAGGCAAGCTGCCACGGGCAAGCCAAGTCTGCTGAATTGCTCATGAGCTCTGATTTAATTCGACCCCACGTTGCTGTACATGCTCTTGTGACGGCATGCTGCAAAGGGTTTGTAACTGTGGTAGATACTCTCATAAAGTGTGGCGTGGATGTAAACGCAGAAGATCGGGTACTTTTGCAGTCAGTTAAGCCTGCTCTCCACACAAATGTTGATTGTACTGCACTTGTTGCTGCTGTGATTCATAGGCAGGTCCCAGTCGTCGCTTTGCTACTGCAGAATGGTGCTAGGATAGACACCAAAGTGAGGCTAGGAGCATGGTCATGGGATGTCATAACGGGTGAAGAAATTCGTGTGGGTGCTGGACTAGGAGAAACTTGCGCCGTAACCTGGTGTGCGGTTGAGTATTTTGAAAAAGGTGGCGCTATACTTTACATGCTCCTGCAGAATGTTTTCCTCAACAACCCTCACTGTGGAAGAACCCTTTTACACCATGCCATTCTTTGCGGCAATGTTGAGGGTGTGAGGATACTCTTAGAATGCGGTGCTGATGTTGAATCCCCAGTTAAAACAACCCAGAAGACTGAATTCCGTCCACTACACATGGCTTCTCGGCTTGGCTTTTCAACAATTGTTCAATGCCTTATTGCTTTTGGTTGTGATTTGAACTCTATTACAGACGCTGGTGACACAGCTTTGATGATCTGTGCAAAATATAAACAAGAGAAATGTCTCAAAGTACTCACAATGTCTGGTGCCGATTTTGGCTTAGTCAATACTGCTGGTCATTGTGCAAGTTCAGTTGCTGAGTCAAACCAGTGGTCACTTGGTTTTCAGAAGGCATTACTGGATACAATCAGAAAAGGGAAAATACCCACATCCAGCAATATCTCTGTGCTTTCACCCCTTCTATTTGCGGCTGAAGCTGGGGATACGGAGGCATTGAAAACTGTAATTGCTTATGGAGGATTCGACCTTGACTATCAAGATGATAATGGCTTCTCTGCTGTTATGGTTTCTGCCTTGAAGGGTCACGTAGAAGCGTTTCGGTTGCTTGTATATGCTGGAGCTGATGTAAAGCTATGCAATAAATATGGTGAATCAGCAATTGCCCTATCTGAGTTGAACCATAATCACGATTTATTTGAAAAAGTCATGCTTGAATTTGCACTTGAAAAGGGCAATCACAATGCTGGCTTCCATGCTTTACACTGTGCAGCTCGTCGTGGCGACTTGGATGCTGTGAAATTGCTCACTGATAAGGGTTATGACGTGAATGTTCTTGACCAGGAAGGCCACACTCCGCTCATGTTAGCAGCAAGAGAAGGCCATGGTTCCATTTGTGAGCTCTTAATTTCACACGGGGCTCGTTGTAATACCAAAAATGCTAGAGGTGAAACTGCACTCTCACTTGCAAGAAAATTTACTGGAGGCAATAAGAACGATGCAGAGGCTGTCATACTAGACGAGATCGCTCGGAAATTAGTAATTGGTGGCACGTACGTGCAAAAGTATACCAAAGGAGGGAAGGGTTCTGCTCATGGCAAAAAGATACAAATGTTGGGATCTGTGGGAGTGTTCTCTTGGGGTAAGTCAAGCCGGAGAAATGTGATATGCCGGGATGCAGAGTTGGGACCAAGTTTATCTTTTCGTAGAAATAGACGCACAAGAGGTGGTGCTGATGATCCAGGAATATTTAGGGTGGTTACTATCAAGAACAAGGAAGTGCATTTTTTATGTGCTGGTGGGTTTGAGACTGCTGAGCTTTGGGTGAGGGGCATAAAACTTGTGACCAGAGAGGCCAAGTTTGGTAGGCACATAGCGTTGATGTGA 2430 0.47 MALHCAKYATRLLDFAAASESYKARANPCLRLYLSAAEARLYCSFELTLAVRRTMTVFSGKQVFPVDYEAEVSQRLLEACHSGDQNLALECVADPFVDVNFFGAVSLKIRKAELVLHEESASEVRFEFEEFKTDVTALFLAVHTGNASLVKKLLSMGADVNQKLFRGFATTAAAREGHIDILEILLKVGASQPACEEALLEASCHGQAKSAELLMSSDLIRPHVAVHALVTACCKGFVTVVDTLIKCGVDVNAEDRVLLQSVKPALHTNVDCTALVAAVIHRQVPVVALLLQNGARIDTKVRLGAWSWDVITGEEIRVGAGLGETCAVTWCAVEYFEKGGAILYMLLQNVFLNNPHCGRTLLHHAILCGNVEGVRILLECGADVESPVKTTQKTEFRPLHMASRLGFSTIVQCLIAFGCDLNSITDAGDTALMICAKYKQEKCLKVLTMSGADFGLVNTAGHCASSVAESNQWSLGFQKALLDTIRKGKIPTSSNISVLSPLLFAAEAGDTEALKTVIAYGGFDLDYQDDNGFSAVMVSALKGHVEAFRLLVYAGADVKLCNKYGESAIALSELNHNHDLFEKVMLEFALEKGNHNAGFHALHCAARRGDLDAVKLLTDKGYDVNVLDQEGHTPLMLAAREGHGSICELLISHGARCNTKNARGETALSLARKFTGGNKNDAEAVILDEIARKLVIGGTYVQKYTKGGKGSAHGKKIQMLGSVGVFSWGKSSRRNVICRDAELGPSLSFRRNRRTRGGADDPGIFRVVTIKNKEVHFLCAGGFETAELWVRGIKLVTREAKFGRHIALM 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1225 809 ProSiteProfiles Ankyrin repeat profile. 597 629 IPR002110 GO:0005515
Lele13g1225 809 ProSiteProfiles Ankyrin repeat region circular profile. 531 558 - -
Lele13g1225 809 ProSiteProfiles Ankyrin repeat region circular profile. 630 661 - -
Lele13g1225 809 Gene3D - 345 474 IPR036770 -
Lele13g1225 809 ProSiteProfiles Ankyrin repeat profile. 357 389 IPR002110 GO:0005515
Lele13g1225 809 Pfam Ankyrin repeat 357 384 IPR002110 GO:0005515
Lele13g1225 809 Gene3D - 223 317 IPR036770 -
Lele13g1225 809 Gene3D - 585 681 IPR036770 -
Lele13g1225 809 PANTHER ANKYRIN REPEAT-CONTAINING 70 782 - -
Lele13g1225 809 ProSiteProfiles Ankyrin repeat region circular profile. 597 628 - -
Lele13g1225 809 ProSiteProfiles Ankyrin repeat profile. 133 165 IPR002110 GO:0005515
Lele13g1225 809 ProSiteProfiles Ankyrin repeat region circular profile. 133 161 - -
Lele13g1225 809 Gene3D - 65 222 IPR036770 -
Lele13g1225 809 ProSiteProfiles Ankyrin repeat profile. 531 563 IPR002110 GO:0005515
Lele13g1225 809 SUPERFAMILY Ankyrin repeat 131 302 IPR036770 -
Lele13g1225 809 SUPERFAMILY Ankyrin repeat 356 672 IPR036770 -
Lele13g1225 809 ProSiteProfiles Ankyrin repeat profile. 630 662 IPR002110 GO:0005515
Lele13g1225 809 ProSiteProfiles Ankyrin repeat profile. 394 426 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 497 527 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 427 456 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 270 299 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 224 253 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 394 423 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 630 659 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 597 626 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 531 560 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 133 162 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 164 194 IPR002110 GO:0005515
Lele13g1225 809 SMART ANK_2a 357 386 IPR002110 GO:0005515
Lele13g1225 809 Pfam Ankyrin repeats (3 copies) 397 455 IPR002110 GO:0005515
Lele13g1225 809 Pfam Ankyrin repeats (3 copies) 499 559 IPR002110 GO:0005515
Lele13g1225 809 Pfam Ankyrin repeats (3 copies) 138 217 IPR002110 GO:0005515
Lele13g1225 809 Pfam Ankyrin repeats (3 copies) 580 661 IPR002110 GO:0005515
Lele13g1225 809 Gene3D - 475 584 IPR036770 -
Lele13g1225 809 ProSiteProfiles Ankyrin repeat region circular profile. 357 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1225 Lele-ChrLele13 22601255 22606239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1225 502 671 Ion Channels AT2G25600 27.586 4.23e-06 48.5