Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1222 ATGTGCATTGTGATTGGGTTTGGGAGGAAGAAACTTGCAAGTGATGAAGAGTTGTGGAATAGGCCGTGTGGTGACGGCACTGGTGGTGCCGCTATTCGGAGGCCCATACTCAAACGACGACGATCAGTTGATTTCGATTCTCTGCCGTGCTTCACATTGTCACTCACACCTTCATTTGATTCCCTTGTTGATGTTAGTTATGGATCTCGCTCGCAGCAAGCAAGTGCAAGCTATCGCTCAAGAGCAACAATGACGGTCTTCTTGGTTGTTCAAGCTTCTTTAGGGATGGCGAATCTTCTTTTTGAGAGGCCAAAGCAACTGGGTTTGATGGAGAAAGAATCGGTTTGGGTCGTACCTGAGGAGGTTGCTGACATTCAGACAGTTCAGGCACAAATTTCGAAGAAAATCGCGTTGGAGTATCCAGAAGAAGAGAACATTAATCCTATTATCTTTGCGCTTCAATCATACGATGCAACTTGGGCTATTGCTCTTGCCGCAAAGAAATCATCACAAAGGAAATTCTCCCACGGACAATTTTCAGAAAGCATTCTTGCCAGTAACTTTGAAGGACTAAGTTGCAAAATTAGCTATAAAAATGGAAAATTATTGCGGCCACGAGCCTTTGAAATAATTAATGTGATTGGGAAAAGCTATATAGATTTGGCATTTTGGTCTCCAGTATTTGGTTTCTGTAAGAACCTTGCCAGACATCAGTTGATGGAGGAGACAAAAAATAATGGTTCTTCTGGAAACTCAGAAACAGTTCATTGGTCAGGAAACTTACTCAGTTCCCAAGTCAACTGCTCTTATGATGAAATGGTTCAGCAAGTCTACAAGAAGGAACTTGATGCTGCCGTTGGAGATACAGGAATAATGCATATAGATATCGTTACGTGTCAGCTTGAACCGTCTGTGTTAGACATCCAAACACTTCAAAGGACAAATGCCGGTGTTGGGTGTAATGGAAATTCATTTATCGTTAGATATTTGACAGAAGTACTAAAATTTAAGCCTAAGAATATTCAGAAAATTGATTCCATAAGTGATTACCCTACAGCCTTTAAGAACAGGGATATTGAAGCAGCTTCTTTGTTGCACCACATGCTAAAGTCTTCCTTGCCAAGTACTCATGCGCAGGCCTCATCAAAGCAGGGACACTTTCAAGCTTGGCAGTTTTGGATTTGTGGATTTGTCTTTCCCTTGTCATTTTGA 1212 0.4175 MCIVIGFGRKKLASDEELWNRPCGDGTGGAAIRRPILKRRRSVDFDSLPCFTLSLTPSFDSLVDVSYGSRSQQASASYRSRATMTVFLVVQASLGMANLLFERPKQLGLMEKESVWVVPEEVADIQTVQAQISKKIALEYPEEENINPIIFALQSYDATWAIALAAKKSSQRKFSHGQFSESILASNFEGLSCKISYKNGKLLRPRAFEIINVIGKSYIDLAFWSPVFGFCKNLARHQLMEETKNNGSSGNSETVHWSGNLLSSQVNCSYDEMVQQVYKKELDAAVGDTGIMHIDIVTCQLEPSVLDIQTLQRTNAGVGCNGNSFIVRYLTEVLKFKPKNIQKIDSISDYPTAFKNRDIEAASLLHHMLKSSLPSTHAQASSKQGHFQAWQFWICGFVFPLSF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1222 403 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 83 292 - -
Lele13g1222 403 Gene3D - 116 203 - -
Lele13g1222 403 SUPERFAMILY Periplasmic binding protein-like I 88 257 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1222 Lele-ChrLele13 22584982 22587810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1222 86 234 Ion Channels AT5G27100 27.749 6.58e-10 59.3