Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1184 ATGGGATCTGGCAATGAGGTTCACTCGATTGGTGAATTCAGTTTAGATGCTCAATGGTTGATAGATCCCAAGCAATTATTAGTTGGGCCAAAAATTGGAGAAGGTGCGCATGCCAAAGTGTACGAAGGAAAATATAGAAATCAGAATGTTGCAGTTAAGATTATTAATAAGGGAGAAACCCCAGAAGAGATCTCAAGGAGAGAGGCACGGTTTGCCAGAGAGGTTGCGATGTTATCAAGAGTTCAACACAAAAATCTTGTTAAGTTTATCGGTGCCTGCAAAGAACCTGTTATGGTTATAGTGACGGAGCTTCTATTAGGTGGAACATTACGCAAATGTCTCTTGAATATGCGGCCGAAGTGCTTGGATATGCGTGTAGCAGTTGGATTTGCTCTTGATATTGCTCGAGCAATGGAATGTTTACATTCCCATGGGATCATTCATCGTGATCTTAAACCTGAGAACTTGATCTTGACAGCAGATCATAAAACAGTTAAACTTGCTGATTTTGGTTTAGCCAGAGAAGAGTCATTAACAGAGATGATGACTGCTGAGACCGGGACATATCGCTGGATGGCTCCCGAACTTTACAGCACTGTCACTCTGAGACAAGGTGAGAAGAAGCATTATAATCATAAGGTGGATGCTTATAGTTTTGCAATTGTCTTATGGGAGCTCATCCATAACAAGTTGCCATTTGAAGGCATGTCTAATCTACAAGCAGCATATGCAGCTGCTTTTAAGAATGTAAGGCCAAGTGCTGAAAACCTTCCTGAGGATTTAGCTCTGATTGTGACTTCATGTTGGAAAGAGGATCCGAATGATCGACCGAATTTCAGTCAAATAATACAGATGCTTCTCCGATATCTCTCCACTATTTCGCCACCAGTGCTTCTCCCACGAATCGCCTCATCTGAGAATGCTGTACTGCCACCGGAATCTCCTGGTACAAGTGCTTTAATGTCCAGAAGAGATGACTCTGGAGAAATTCCAAAAGAAGTTGACATGGAAGACAGGCCTAGAGCCGTCGACAAAAGCCCCAATGTTACTCTCCCGAAGCAAAGCCTCTCTGAGGTTCGGTCAACGGTGGGTCCTTCCGAACCGAGCTGGCTTATTGATGTTGGAGGTTTTGCTAAGAAAGTGAAAAGCAGTTCTCTGCCCTCAGCTGAGCAAATCAAAGACTGTGGGGCATATCGTGAATGTCCAAATTGTCACGGACAAATTGATAATAGTGATGTTTCTCCCGAGTGGCCTGGCTTTCCAGCTGGTGTAAAATTTGATCCTTCTAGTACAGAGCTCTTAGAACATTTAGCAGCAAAATGTGGTATTGGAAATGCAGAGCCACACATGTTTATCCACGAGTTCATTCCTACGCTGGAGGGTTCTGAGGGTATTTGCTACACTCATCCAGAAAATCTTCCAGGTGCTAAAAAAGATGGGAGTAGTGCCCATTTCTTTCATAGAACAACTAATGCCTATGCATGTGGTCAACGAAAGCGTCGAAAGATTCATCATCAACATGGTGCAACTGAGGAGCATGTGAGGTGGCACAAGACTGGTAAGACCAAATCTGTGATGGAAGATGGCATACACAAGGGTTTTAAAAAGATCATGGTTCTTTATATAAGACCCGAGAAAGGTTCAAAGCCATATAAATCCAACTGGGTGATGCATCAATACCATCTGGGGGCGGAAGCAGAGGAGAAGGAAGGTGAATACGTGGTCTCAAAAGTTTTTTATCAAAAGAAGTCGCTCGAGAAAAATGAGGAGAATTCATTAGTTGAAGAATCAGATAATATGACATCACAAACAAGTCCGAGAACACCAAATCCAAATCCCCGCAATCCACCTCGACCAGGGAATTCTGCTGACTGTGATGATAATTTCGATGAGAAAGTACTTCTGCCATTCAACAGGGATGCCAAGTCTATCCCTCTAGAGCCAAGTGCCCTACCGATTGATCTCCAGGATGAGGATGATACGAATGGCCCTGGATGGTTGGCTGGGGAATCACAGGCTGTTGAAAACTCTGACTTTGATGGCTTGGATGACATATTATTATGCAAGGAGATCTTAGATTCTTCTGATCAATTAAATGATTCTGGAATGAACTCCACCACTGTCAATGGCTTTGTCAGCAACACGAACATGATAGGCGGAAATGACAATGCAACCTTCGGAATCTCTGACCTGGATAACCTGGAATTGGGTACTCCTCCAGATTTCCAACTTTCTAGACATTACTGGCTATCTCAGATTCCTGAACTCTTTCAGCTTCCCGGTAAGCTGACGCCAGAATTTGAGCACTCAGCATGTGGGCGGTGTTTGCATGAATTTATCCTTAACAGTCCAATGTTTGCAGCAAGAAATTTACAGAGGCATTGCTTGAAGTTCTCACGCTCTATCCTCCAATCGCATCTGTCCAAAAATGCCATATATTTGGGACATACATCTCAGCATATATCAAGCAACATAATTCAGGCATACAACGAAGTTACTTCTTATTCTTATGTCGAGCCATTGAATTCATTCAATGTATCATCCCGGACAATGTCAACATCGAGAGGTAGAAGCATTCGGAGCAAGGTGGAAAGGCGAATGCAGAAAGAGTCTGGTAAAACATTAAGGGAGATTCGTAGAGCTAAAAAATTGAAAAAGAAGCTAATGACTGAGGAGGAGAGGCTTATTTACAATCTCAAAAGAGCCAAGAAGAAAGTGGCATTGTTACTACAAAAACTCAAGAAATATGAGCTTCCAGAGTTGCCTCCTCCTCGACATGATCCTGAGCTATTAACACCAGAACAGCTTCAGGCTTATAAAAAAATTGGATTCAGGAATAAGAATTATGTTCCAGTTGGTGTCCGAGGAGTTTTTGGTGGGGTGGTGCAAAATATGCATCTCCACTGGAAGTTTCATGAGACTGTTCAAGTTTGTTGTGATAACTTCCCCAAGGAAAAAATAAAAGAAATGGCCACAATGCTTGCTAGATTGAGTGGTGGTATTGTGATAAATATTCATAACGTGAAAACAATTATTATGTTCCGAGGCAGAAACTATCGCCAACCCAAAAATTTGATACCTATTAACACCCTTACAAAACGGAAGGCTCTTTTTAAGGCCAGATTTGAGCAAGCTCTTGAATCTCAAAAGTTAAACATAAAGCAAATAGAGCAGCAGCTCCGGCGTATGGGTGTAAATCCTGAGGATCCAACTGCCATGGCCAGCATCCAGAGAGTCGCTTCAACGTTCTTCAATGCTATTGACAAGAAAGAAGGAAGCCCTTATGTTTTTCATGAAAGCAAACTGTCAGGTAAAGAAACTGTTGAAGATTTGGAAGAGCCAGAACCTTCTGCCGATAGTGACCAGGAAGAGCTAGACCGGTTCATTGCTGAGATAGAAGATGCTGCAGATAAAGAATATGAAGCTGAAGAGGCAAAAGAAAAGGAAGAATTTGGCAGAATTAGGTACCTGAATAGAGAAGAATTTGCAGGAAGATATAGAAAATTTGATAGACCTGGAAATGATGATTATGATAGTGTTAGAGGTTCAAGGTTTCGGCAGACTGCACATGCTAAGCAGCAGGCTAGTGATAGTGATGTCGAAAACAATACACTTTCTGATGATGATGATGATGATGATGATGGGGAGTGGCTTGCCTATCCTGACGGTAATTCTGATGACGTTAGTGAGGCTAAAGGCAGGTTCAAGGCAAGTAAGGTGGACAGGGAAAAAAGAAGTAATTTTGGCAGGACCCAAGTTAATGGAAGTTTAAATAGACAGGAAGGTAAATTTAGGAAAAATTCACGCATGGCTGATTCTGACTCGGAAGGTATGTGCAGTGATCTTGACAATGCGATGTGGGAGTCCGACGAGGAAGAAAATGAATCATCAAGACAGTTCAGTGGCAGTGGTAACTACAAGAGCAACAGTTATCACACAAAGATGGACAGGAGAAATGGTGTGAGGCATCATGGGATTGGTGGTGATGACTCAGACCAAAATTGGGATGGCTTTGATGTTCCAAAAAGTATGAGAGAGAAGCAAGGTGGTAGGTTTGGAAGAGCCGATACAAACCAACGGTCGATGAGTTTAGAATCCGAATCTGAAGATATGGCTAGTGACTCGGAAAACAGGATGTGGCATTCAGGGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGTTTAGACAGAGTCGGAGGGTGAGTGGGCATGAAGAGAGGGAAAATGACAATAGCCATAAGAGAGGCCCAAAAGATCAAGATGAGGCTTGGGACAGTGACTAG 4281 0.4268 MGSGNEVHSIGEFSLDAQWLIDPKQLLVGPKIGEGAHAKVYEGKYRNQNVAVKIINKGETPEEISRREARFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKCLLNMRPKCLDMRVAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEDLALIVTSCWKEDPNDRPNFSQIIQMLLRYLSTISPPVLLPRIASSENAVLPPESPGTSALMSRRDDSGEIPKEVDMEDRPRAVDKSPNVTLPKQSLSEVRSTVGPSEPSWLIDVGGFAKKVKSSSLPSAEQIKDCGAYRECPNCHGQIDNSDVSPEWPGFPAGVKFDPSSTELLEHLAAKCGIGNAEPHMFIHEFIPTLEGSEGICYTHPENLPGAKKDGSSAHFFHRTTNAYACGQRKRRKIHHQHGATEEHVRWHKTGKTKSVMEDGIHKGFKKIMVLYIRPEKGSKPYKSNWVMHQYHLGAEAEEKEGEYVVSKVFYQKKSLEKNEENSLVEESDNMTSQTSPRTPNPNPRNPPRPGNSADCDDNFDEKVLLPFNRDAKSIPLEPSALPIDLQDEDDTNGPGWLAGESQAVENSDFDGLDDILLCKEILDSSDQLNDSGMNSTTVNGFVSNTNMIGGNDNATFGISDLDNLELGTPPDFQLSRHYWLSQIPELFQLPGKLTPEFEHSACGRCLHEFILNSPMFAARNLQRHCLKFSRSILQSHLSKNAIYLGHTSQHISSNIIQAYNEVTSYSYVEPLNSFNVSSRTMSTSRGRSIRSKVERRMQKESGKTLREIRRAKKLKKKLMTEEERLIYNLKRAKKKVALLLQKLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINIHNVKTIIMFRGRNYRQPKNLIPINTLTKRKALFKARFEQALESQKLNIKQIEQQLRRMGVNPEDPTAMASIQRVASTFFNAIDKKEGSPYVFHESKLSGKETVEDLEEPEPSADSDQEELDRFIAEIEDAADKEYEAEEAKEKEEFGRIRYLNREEFAGRYRKFDRPGNDDYDSVRGSRFRQTAHAKQQASDSDVENNTLSDDDDDDDDGEWLAYPDGNSDDVSEAKGRFKASKVDREKRSNFGRTQVNGSLNRQEGKFRKNSRMADSDSEGMCSDLDNAMWESDEEENESSRQFSGSGNYKSNSYHTKMDRRNGVRHHGIGGDDSDQNWDGFDVPKSMREKQGGRFGRADTNQRSMSLESESEDMASDSENRMWHSGEEEEEEEEEEFRQSRRVSGHEERENDNSHKRGPKDQDEAWDSD 1426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1184 1426 ProSiteProfiles NAC domain profile. 420 581 IPR003441 GO:0003677|GO:0006355
Lele13g1184 1426 FunFam NAC domain-containing protein 8 429 585 - -
Lele13g1184 1426 Gene3D Transferase(Phosphotransferase) domain 1 108 296 - -
Lele13g1184 1426 SUPERFAMILY NAC domain 407 581 IPR036093 GO:0003677|GO:0006355
Lele13g1184 1426 CDD STKc_MAP3K-like 32 286 - -
Lele13g1184 1426 Pfam CRS1 / YhbY (CRM) domain 931 1015 IPR001890 GO:0003723
Lele13g1184 1426 MobiDBLite consensus disorder prediction 325 344 - -
Lele13g1184 1426 MobiDBLite consensus disorder prediction 1105 1124 - -
Lele13g1184 1426 Coils Coil 1039 1066 - -
Lele13g1184 1426 MobiDBLite consensus disorder prediction 1202 1220 - -
Lele13g1184 1426 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 789 1216 IPR040286 -
Lele13g1184 1426 MobiDBLite consensus disorder prediction 1354 1368 - -
Lele13g1184 1426 MobiDBLite consensus disorder prediction 1186 1201 - -
Lele13g1184 1426 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1184 1426 SUPERFAMILY Protein kinase-like (PK-like) 18 303 IPR011009 -
Lele13g1184 1426 SUPERFAMILY YhbY-like 930 1024 IPR035920 -
Lele13g1184 1426 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Lele13g1184 1426 MobiDBLite consensus disorder prediction 308 349 - -
Lele13g1184 1426 MobiDBLite consensus disorder prediction 1311 1353 - -
Lele13g1184 1426 FunFam Kinase suppressor of Ras 1 15 105 - -
Lele13g1184 1426 Gene3D NAC domain 431 586 IPR036093 GO:0003677|GO:0006355
Lele13g1184 1426 SMART CRS1_YhbY_2 931 1015 IPR001890 GO:0003723
Lele13g1184 1426 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Lele13g1184 1426 MobiDBLite consensus disorder prediction 1393 1426 - -
Lele13g1184 1426 MobiDBLite consensus disorder prediction 1165 1426 - -
Lele13g1184 1426 MobiDBLite consensus disorder prediction 1165 1185 - -
Lele13g1184 1426 Coils Coil 1118 1138 - -
Lele13g1184 1426 Coils Coil 885 905 - -
Lele13g1184 1426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Lele13g1184 1426 Pfam No apical meristem (NAM) protein 421 562 IPR003441 GO:0003677|GO:0006355
Lele13g1184 1426 MobiDBLite consensus disorder prediction 1227 1248 - -
Lele13g1184 1426 Gene3D - 930 1026 IPR035920 -
Lele13g1184 1426 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1184 1426 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Lele13g1184 1426 ProSiteProfiles CRM domain profile. 929 1026 IPR001890 GO:0003723
Lele13g1184 1426 MobiDBLite consensus disorder prediction 588 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1184 Lele-ChrLele13 22380692 22392843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1184 1 325 MAP Kinase Kinase Kinase AT3G27560 81.763 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele13g1184 PK_Tyr_Ser-Thr 8.7e-56 CL0016
TF NAC Lele13g1184 PK_Tyr_Ser-Thr 8.7e-56 CL0016