Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1180 ATGGCATCTTCGTCAAGCTACAACTCTCCATGTGCAGCGTGCAAGTTTCTGAGAAGGAAGTGCATGCCAGACTGCATATTTGCGCCATATTTCCCACCAGAAGAGCCTCAAAAATTTGCAAACGTTCACAAGATATTCGGAGCAAGCAACGTGAGCAAGCTTCTGAACGAAGTGTTGCCTCATCAAAGAGAAGATGCAGTGAATTCTCTGGCCTATGAAGCTGAGGCAAGGATCGAGGATCCAGTGTATGGCTGTGTAGGAGCCATTTCTGTGCTCCAGAGGCAAGTCATAAGGCTCCAGAAGGAACTAGACGCCACAAATGCAGAAATGATTCGCTACACTTGCACTGAAATTCCCACTGATGCAACTAGATTATTGGGAAACGAAGGACCTGGAGGTTCGTCGTCTTCTCTTCTTTCTCAATCTCCTTCTGCTTTTTACTATCCTTCTCCTTGGAATAATGATCTCTGTGGGGATGGCTTTCATCACATTCACAGAGGAGGGGCAGATAATAGTAACATGTGA 525 0.459 MASSSSYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIEDPVYGCVGAISVLQRQVIRLQKELDATNAEMIRYTCTEIPTDATRLLGNEGPGGSSSSLLSQSPSAFYYPSPWNNDLCGDGFHHIHRGGADNSNM 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1180 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 123 - -
Lele13g1180 174 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lele13g1180 174 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Lele13g1180 174 Coils Coil 89 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1180 Lele-ChrLele13 22352117 22352641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1180 1 113 AS2 family AT5G63090 87.719 1.17e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele13g1180 LOB 4.7e-42 No_clan