Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1177 ATGCCTCAACGACCAAAAAGGAGGATACATTTTAGCAAACTATATTCATTTTCGTGCATAAAATCCCCCTTCAGACATGACCAGTCTCAAATTGGGCAGAGAGCCTACTCAAGGGTCGTATATTGCAATGTTCCTGATAACCCAGAAGCTGTTCAGTTGAATTACATAGGCAACTATGTTTCAACGACCAAGTATACGGCTTTTAATTTTATTCCCAAGTCTTTATTTGAGCAGTTTAGGAGGGTTGCAAATATCTACTTTCTCATTGTCGCGTGTCTTTCGTTTAGTCCCTTGGCACCTTTCACACCTTTAAGTATTGTTGCACCGTTGCTTGTGGTGATGGGAGTTACCATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGAAGAAAACAGGATATTGAAGCAAACAACAAAAAGGTTAATGTATTTAGTGGAAATACATTTGTGGAGACCAGATCCAAGAAACTCCGGGTGGGTGATCTCATCAAAGTGTATAAGGATGAATATTTCCCTGCTGATCTTCTTCTGCTTTCATCGAGTTATGAGGATGGGGTTTGCTATGTTGAGACAATGAATCTTGATGGAGAAACCAATCTAAAACTAAAGCATGCTTTGGAAGCCACAGCTCATATTCATGATGAAAAAACTCTTGAAAAGTTTACGGCAGTGGTCAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTGTTGGAACATTGTACTATGAAGACAAAGAATATCCGCTTTCCTTGCAACAGATTCTTTTAAGAGACTCCAAGCTGAAAAACACTGAATATGTTTATGCTGTTGTTATCTTTACTGGCCATGATACAAAAGTGATGCAGAATGCCACTGACCCACCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAAATAATCTATATCCTCTTTAGTACGTTGGTCTTGATATCTTTTATTGGCTCTGTCTATTTTGGCATTGAGACAAAAAGGGATCTTAACGACAGCAAGTGCACGAGATGGTATCTTCGTCCGGACAATACAACAGTGTTTTACGATCCTAGAAGGGCAATACTTGCTGCTATTCTTCATTTTCTAACTGCCCTTATGTTGTATGGATATCTAATTCCCATCTCACTATATGTATCCATTGAAATGGTGAAAGTCTTGCAGAGTGTTTTCATAAACCATGATCAGGAAATGTATTATGAAGAAGCTGATAGGCCAGCTCATGCACGCACATCTAATTTAAATGAGGAACTTGGGCAGGTTGATACTATATTGTCTGACAAAACAGGTACTTTGACATGTAACTCTATGGAGTTTGTGAAATGTTCCATAGCTGGCACTCCATATGGTCGTGGTATGACAGAAGTGGAGAGAGCACTTGCACAGAGGGGGAGAAATCAGGAACCAGAAGCCGATGGCTTACCATCTGATTTACAAGGACAGAATAATGATGCTGTGGACTCCAGGCGGCCAGTTAAGGGTTTCCACTTTAGAGATGAACGTATAATGAATGGAAAATGGGTTAATGAAACTCATTCAGACATCATACAGAAATTCTTTAGAGTTTTAGCAATCTGTCATACAGCTATTCCTGATGTAGATGAACAATCCGGAGAAATTTCCTATGAAGCTGAGTCGCCAGATGAAGCAGCTTTTGTCATTGCTGCAAGGGAACTTGGTTTTGAGTTTTTTGAAAGGACACAAACAAGTATATCATTGCATGAATTGGACTACGACAGCGGAGAAAAGGTTGACAGGGTGTACGAGCTTTTGCATGTCTTGGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATTGTAAGGAATGAAAAAAATCAACTATTGCTCCTATGCAAGGGTGCAGACAGTGTTATGCTTGAAAGGGTCTCCCAAGATGGAAGAAAATTTGAGGCTGAGACTGTAGATCATATCAAAAGATATTCTGAGGCGGGTTTAAGAACTCTGGTAATCGCGTATCGTGTACTTGGTGAAGAAGAATATAAGTTGTGGGAAAGGGAGTTTTTAAAAGCCAAAACTTCTGTTGCTGTAGATCGTGATGTGTTGGTGGACACCGTTGCCGATAAGATGGAAAGAGATTTGATTCTTCTTGGTGCAACAGCAGTTGAGGATAGACTACAGAAAGGGGTTCCTGAATGTATCAATAAGCTCGCCCAGGCAGGAATAAAATTATGGGTATTGACTGGGGACAAGATGGAAACTGCAGTCAACATAGGGTATGCTTGCAGTTTACTTAGACAAGACATGAAACAGATAGTGATAACTCTGGATTCACCAGATATTCTATCCTTAGAAAAACAAGGGGACAAGGAAGCTCTTACAAAGGCCTCTCTTGAAAGCATTAAGAAGCAAATCAGAGAGGGAATTTCACAAATCAAGTCTGCAAAAGAGAATTCTAAAGAAACTTCTACTGAATTCGGCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAACAAGAACGTCGAGAAGTCATTTTTTGATCTAGCCATTAATTGTGCTTCTGTCATTTGTTGCCGATCTTCACCCAAACAGAAAGCTCGTGTAACAAGATTGGTGAAATTGGGAACTGGGAAGACAACACTATCAATCGGTGATGGTGCGAATGATGTCGGCATGCTTCAGGAGGCTGATATAGGAGTTGGTATTAGTGGTGCCGAAGGGATGCAGGCTGTGATGGCAAGTGATTTTGCCGTAGCTCAGTTTCGATTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGTTATAGACGAATCGCAATGATGATATGCTATTTTTTCTATAAGAACATTGCATTCGGATTTACTCTATTTTGGTTCGAGGCGTACGCTTCTTTCTCTGGACAACCTGCATACAATGATTGGTACATGTCATTTTACAATGTTTTCTTCACTTCACTTCCTGTAATTGCTCTGGGTGTTTTCGATCAGGATGTTTCTGCCCGACTTTGCCTCAAGTATCCTTTTTTATATCTTGAGGGAATAGAGGACATTCTCTTCAGCTGGCCTCGGATTCTCGGGTGGATGTTCAACGGGGTCATCACGTCGTTGATTATCTTCTTCTTGACCATAAACTCTGTGTTGAACCAGGCCTTTAGAAGTGACGGTCATGTGGTTGATTGGGAAATACTTGGAGTCACAATGTACACTTGTGTGGTGTGGACTGTGAATTGTCAAATGGGACTATCCATTAATTACTTCACTTGGATTCAACATTTTTTCATATGGGGCAGCATTGTCTTCTGGTATGTGTTCTTGCTGGTTTATGGCTATCTCCCTCCAGCCATATCCACAACAGCTTACAAAATTCTTGTGGACGCCTGTGCTCCCAGTGGTCTCTATTGGCTCGTTACTCTCTTCGTCGTCGTGTGCGCTCTTCTTCCCTATTTCTCGTATCGGTCTTTCCAGACTCGGTTTTTACCAATGTACCATGATATTATTCAAAAAAGACGAGTGGAAGGGTCCGAAACCGAGACATCGAAAGATCTGCCAAAAAGTGTCGAGGGCAAGCTAAGCCATCTCCGAGAAAGATTGAAGGAAAGGGACTTGTAA 3570 0.4104 MPQRPKRRIHFSKLYSFSCIKSPFRHDQSQIGQRAYSRVVYCNVPDNPEAVQLNYIGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACLSFSPLAPFTPLSIVAPLLVVMGVTMAKEAVEDWRRRKQDIEANNKKVNVFSGNTFVETRSKKLRVGDLIKVYKDEYFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEATAHIHDEKTLEKFTAVVKCEDPNENLYSFVGTLYYEDKEYPLSLQQILLRDSKLKNTEYVYAVVIFTGHDTKVMQNATDPPSKRSKIERKMDKIIYILFSTLVLISFIGSVYFGIETKRDLNDSKCTRWYLRPDNTTVFYDPRRAILAAILHFLTALMLYGYLIPISLYVSIEMVKVLQSVFINHDQEMYYEEADRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTPYGRGMTEVERALAQRGRNQEPEADGLPSDLQGQNNDAVDSRRPVKGFHFRDERIMNGKWVNETHSDIIQKFFRVLAICHTAIPDVDEQSGEISYEAESPDEAAFVIAARELGFEFFERTQTSISLHELDYDSGEKVDRVYELLHVLEFSSSRKRMSVIVRNEKNQLLLLCKGADSVMLERVSQDGRKFEAETVDHIKRYSEAGLRTLVIAYRVLGEEEYKLWEREFLKAKTSVAVDRDVLVDTVADKMERDLILLGATAVEDRLQKGVPECINKLAQAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALTKASLESIKKQIREGISQIKSAKENSKETSTEFGLIIDGKSLDYSLNKNVEKSFFDLAINCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAVAQFRFLERLLLVHGHWCYRRIAMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKYPFLYLEGIEDILFSWPRILGWMFNGVITSLIIFFLTINSVLNQAFRSDGHVVDWEILGVTMYTCVVWTVNCQMGLSINYFTWIQHFFIWGSIVFWYVFLLVYGYLPPAISTTAYKILVDACAPSGLYWLVTLFVVVCALLPYFSYRSFQTRFLPMYHDIIQKRRVEGSETETSKDLPKSVEGKLSHLRERLKERDL 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1177 1189 SFLD Haloacid Dehalogenase 405 920 - -
Lele13g1177 1189 Coils Coil 782 802 - -
Lele13g1177 1189 FunFam Phospholipid-transporting ATPase 543 701 - -
Lele13g1177 1189 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Lele13g1177 1189 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Lele13g1177 1189 FunFam Phospholipid-transporting ATPase 700 909 - -
Lele13g1177 1189 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Lele13g1177 1189 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1147 IPR023298 -
Lele13g1177 1189 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele13g1177 1189 Gene3D - 701 909 IPR023214 -
Lele13g1177 1189 Gene3D - 539 700 IPR023299 GO:0000166
Lele13g1177 1189 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 664 IPR023299 GO:0000166
Lele13g1177 1189 Pfam Phospholipid-translocating P-type ATPase C-terminal 897 1147 IPR032630 -
Lele13g1177 1189 Pfam E1-E2 ATPase 136 339 - -
Lele13g1177 1189 CDD P-type_ATPase_APLT_Dnf-like 57 1029 - -
Lele13g1177 1189 Gene3D - 111 286 - -
Lele13g1177 1189 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 840 951 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele13g1177 1189 Pfam Cation transport ATPase (P-type) 541 628 - -
Lele13g1177 1189 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 34 1157 - -
Lele13g1177 1189 SUPERFAMILY HAD-like 418 924 IPR036412 -
Lele13g1177 1189 MobiDBLite consensus disorder prediction 458 487 - -
Lele13g1177 1189 FunFam Phospholipid-transporting ATPase 116 285 - -
Lele13g1177 1189 Coils Coil 116 136 - -
Lele13g1177 1189 SFLD p-type atpase 405 920 IPR044492 -
Lele13g1177 1189 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Lele13g1177 1189 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1177 Lele-ChrLele13 22326920 22333002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1177 9 1160 Primary Pumps ATPases AT1G68710 64.027 0.0 1597