Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1167 ATGCTTCTAGACAGGACTCGGACCTTGAAAATAGCTGATTTTGGAGTGGCTCGTATTGAGGCTTCCAATCCTCATGACATGACTGGTGAAACTGGAACTCTTGGTTACATGGCTCCTGAGGTTTTAAACGGTAATCCATACAATAGGAAGTGTGATGTGTATAGTTTTGGTATATGCTTATGGGAGATATATTGCTGTGACATGCCGTATCCAGATCTTAGCTTCTCAGAAGTGACTTCAGCTGTTGTACGTCAGAATCTGAGGCCGGAGATACCAAGATGTTGCCCGAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCTAACCCAGATAGGAGGCCAGACATGGATGAGGTGGTTTCCATGTTGGAAGCTATTGACACTTCAAAAGGTGGAGGGATGATCCCAGTTGATCAGCCTCAGGGTTGTTTTTGTTTCTTCAGGTATCGAGGACCTTGA 462 0.4524 MLLDRTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDRRPDMDEVVSMLEAIDTSKGGGMIPVDQPQGCFCFFRYRGP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1167 153 SUPERFAMILY Protein kinase-like (PK-like) 2 124 IPR011009 -
Lele13g1167 153 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1167 153 Gene3D Transferase(Phosphotransferase) domain 1 1 138 - -
Lele13g1167 153 Pfam Protein tyrosine and serine/threonine kinase 2 124 IPR001245 GO:0004672|GO:0006468
Lele13g1167 153 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1167 Lele-ChrLele13 22275418 22276455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1167 1 153 MAP Kinase Kinase Kinase AT3G22750 79.739 6.38e-94 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele13g1167 PK_Tyr_Ser-Thr 5.2e-32 CL0016